RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 PNPLA6Q8IY17 1366 aa18.87■□□□□ 0.61
CTSD-210ENST00000637381 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
CTSD-210ENST00000637381 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
CTSD-210ENST00000637381 MYOM2P54296 1465 aa18.86■□□□□ 0.61
CTSD-210ENST00000637381 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
CTSD-210ENST00000637381 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
CTSD-210ENST00000637381 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
CTSD-210ENST00000637381 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
CTSD-210ENST00000637381 STK26Q9P289 416 aa18.83■□□□□ 0.6
CTSD-210ENST00000637381 NUTM2BA6NNL0 878 aaPredicted RBP18.82■□□□□ 0.6
CTSD-210ENST00000637381 NUTM2EB1AL46 878 aaPredicted RBP18.82■□□□□ 0.6
CTSD-210ENST00000637381 NUTM2AQ8IVF1 878 aaPredicted RBP18.82■□□□□ 0.6
CTSD-210ENST00000637381 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
CTSD-210ENST00000637381 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
CTSD-210ENST00000637381 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
CTSD-210ENST00000637381 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
CTSD-210ENST00000637381 PXDNQ92626 1479 aa18.78■□□□□ 0.6
CTSD-210ENST00000637381 AFF2P51816 1311 aa18.78■□□□□ 0.6
CTSD-210ENST00000637381 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
CTSD-210ENST00000637381 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
CTSD-210ENST00000637381 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
CTSD-210ENST00000637381 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.59
CTSD-210ENST00000637381 RXRBP28702 533 aa18.76■□□□□ 0.59
CTSD-210ENST00000637381 STAC3Q96MF2 364 aa18.76■□□□□ 0.59
CTSD-210ENST00000637381 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
CTSD-210ENST00000637381 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
CTSD-210ENST00000637381 RGPD8O14715 1765 aaPredicted RBP18.74■□□□□ 0.59
CTSD-210ENST00000637381 FOXO3O43524 673 aa18.74■□□□□ 0.59
CTSD-210ENST00000637381 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
CTSD-210ENST00000637381 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
CTSD-210ENST00000637381 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
CTSD-210ENST00000637381 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
CTSD-210ENST00000637381 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
CTSD-210ENST00000637381 NUTM2FA1L443 756 aa18.7■□□□□ 0.58
CTSD-210ENST00000637381 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
CTSD-210ENST00000637381 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
CTSD-210ENST00000637381 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
CTSD-210ENST00000637381 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
CTSD-210ENST00000637381 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
CTSD-210ENST00000637381 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
CTSD-210ENST00000637381 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
CTSD-210ENST00000637381 SPATA31A3Q5VYP0 1347 aa18.67■□□□□ 0.58
CTSD-210ENST00000637381 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
CTSD-210ENST00000637381 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
CTSD-210ENST00000637381 PHF8Q9UPP1 1060 aa18.65■□□□□ 0.58
CTSD-210ENST00000637381 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
CTSD-210ENST00000637381 ANKARQ7Z5J8 1434 aa18.65■□□□□ 0.58
CTSD-210ENST00000637381 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
CTSD-210ENST00000637381 POGKQ9P215 609 aa18.64■□□□□ 0.57
CTSD-210ENST00000637381 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CTSD-210ENST00000637381 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
CTSD-210ENST00000637381 RGS12O14924 1447 aa18.63■□□□□ 0.57
CTSD-210ENST00000637381 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
CTSD-210ENST00000637381 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
CTSD-210ENST00000637381 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
CTSD-210ENST00000637381 ATRNO75882 1429 aa18.62■□□□□ 0.57
CTSD-210ENST00000637381 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
CTSD-210ENST00000637381 PSME1Q06323 249 aa18.61■□□□□ 0.57
CTSD-210ENST00000637381 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.6■□□□□ 0.57
CTSD-210ENST00000637381 KIAA1210Q9ULL0 1709 aa18.6■□□□□ 0.57
CTSD-210ENST00000637381 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
CTSD-210ENST00000637381 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
CTSD-210ENST00000637381 SLIT2O94813 1529 aa18.58■□□□□ 0.56
CTSD-210ENST00000637381 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
CTSD-210ENST00000637381 WASLO00401 505 aaPredicted RBP18.57■□□□□ 0.56
CTSD-210ENST00000637381 TULP4Q9NRJ4 1543 aa18.57■□□□□ 0.56
CTSD-210ENST00000637381 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
CTSD-210ENST00000637381 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
CTSD-210ENST00000637381 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
CTSD-210ENST00000637381 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
CTSD-210ENST00000637381 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
CTSD-210ENST00000637381 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
CTSD-210ENST00000637381 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
CTSD-210ENST00000637381 PMFBP1Q8TBY8 1022 aa18.54■□□□□ 0.56
CTSD-210ENST00000637381 UNC5CLQ8IV45 518 aa18.53■□□□□ 0.56
CTSD-210ENST00000637381 GJD4Q96KN9 370 aaPredicted RBP18.53■□□□□ 0.56
CTSD-210ENST00000637381 NWD2Q9ULI1 1742 aa18.52■□□□□ 0.56
CTSD-210ENST00000637381 ITSN1Q15811 1721 aa18.52■□□□□ 0.55
CTSD-210ENST00000637381 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
CTSD-210ENST00000637381 EP400Q96L91 3159 aa18.5■□□□□ 0.55
CTSD-210ENST00000637381 GLI3P10071 1580 aa18.5■□□□□ 0.55
CTSD-210ENST00000637381 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
CTSD-210ENST00000637381 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
CTSD-210ENST00000637381 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
CTSD-210ENST00000637381 ATP7BP35670 1465 aa18.49■□□□□ 0.55
CTSD-210ENST00000637381 RALGAPBQ86X10 1494 aa18.48■□□□□ 0.55
CTSD-210ENST00000637381 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
CTSD-210ENST00000637381 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
CTSD-210ENST00000637381 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
CTSD-210ENST00000637381 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
CTSD-210ENST00000637381 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
CTSD-210ENST00000637381 VPS72Q15906 364 aa18.46■□□□□ 0.55
CTSD-210ENST00000637381 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
CTSD-210ENST00000637381 CDK19Q9BWU1 502 aa18.46■□□□□ 0.55
CTSD-210ENST00000637381 ONECUT3O60422 494 aaPredicted RBP18.45■□□□□ 0.54
CTSD-210ENST00000637381 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
CTSD-210ENST00000637381 NGDNQ8NEJ9 315 aaKnown RBP18.44■□□□□ 0.54
CTSD-210ENST00000637381 POLR3AO14802 1390 aaPredicted RBP18.43■□□□□ 0.54
CTSD-210ENST00000637381 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
CTSD-210ENST00000637381 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms