RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
CACNA1A-239ENST00000637297 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
CACNA1A-239ENST00000637297 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
CACNA1A-239ENST00000637297 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-239ENST00000637297 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
CACNA1A-239ENST00000637297 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
CACNA1A-239ENST00000637297 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
CACNA1A-239ENST00000637297 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
CACNA1A-239ENST00000637297 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-239ENST00000637297 DCCP43146 1447 aa13.03□□□□□ -0.32
CACNA1A-239ENST00000637297 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-239ENST00000637297 EIF3AQ14152 1382 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-239ENST00000637297 NUTM2FA1L443 756 aa13□□□□□ -0.33
CACNA1A-239ENST00000637297 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
CACNA1A-239ENST00000637297 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
CACNA1A-239ENST00000637297 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-239ENST00000637297 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
CACNA1A-239ENST00000637297 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
CACNA1A-239ENST00000637297 MST1RQ04912 1400 aa12.97□□□□□ -0.33
CACNA1A-239ENST00000637297 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
CACNA1A-239ENST00000637297 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
CACNA1A-239ENST00000637297 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
CACNA1A-239ENST00000637297 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-239ENST00000637297 RGPD8O14715 1765 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-239ENST00000637297 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
CACNA1A-239ENST00000637297 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
CACNA1A-239ENST00000637297 HSPA1LP34931 641 aa12.95□□□□□ -0.34
CACNA1A-239ENST00000637297 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
CACNA1A-239ENST00000637297 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
CACNA1A-239ENST00000637297 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
CACNA1A-239ENST00000637297 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-239ENST00000637297 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CACNA1A-239ENST00000637297 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
CACNA1A-239ENST00000637297 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
CACNA1A-239ENST00000637297 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
CACNA1A-239ENST00000637297 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
CACNA1A-239ENST00000637297 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-239ENST00000637297 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
CACNA1A-239ENST00000637297 USP47Q96K76 1375 aa12.91□□□□□ -0.34
CACNA1A-239ENST00000637297 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
CACNA1A-239ENST00000637297 TULP4Q9NRJ4 1543 aa12.9□□□□□ -0.34
CACNA1A-239ENST00000637297 FOXO3O43524 673 aa12.9□□□□□ -0.34
CACNA1A-239ENST00000637297 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
CACNA1A-239ENST00000637297 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
CACNA1A-239ENST00000637297 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
CACNA1A-239ENST00000637297 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
CACNA1A-239ENST00000637297 PSME1Q06323 249 aa12.89□□□□□ -0.35
CACNA1A-239ENST00000637297 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-239ENST00000637297 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
CACNA1A-239ENST00000637297 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-239ENST00000637297 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
CACNA1A-239ENST00000637297 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
CACNA1A-239ENST00000637297 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
CACNA1A-239ENST00000637297 TMF1P82094 1093 aa12.86□□□□□ -0.35
CACNA1A-239ENST00000637297 XPCQ01831 940 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-239ENST00000637297 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
CACNA1A-239ENST00000637297 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
CACNA1A-239ENST00000637297 TMC1Q8TDI8 760 aa12.84□□□□□ -0.35
CACNA1A-239ENST00000637297 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-239ENST00000637297 ATP7BP35670 1465 aa12.84□□□□□ -0.35
CACNA1A-239ENST00000637297 COL16A1Q07092 1604 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-239ENST00000637297 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 JCADQ9P266 1359 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 TESK2Q96S53 571 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 CABP1Q9NZU7 370 aa12.83□□□□□ -0.36
CACNA1A-239ENST00000637297 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
CACNA1A-239ENST00000637297 ACEP12821 1306 aa12.82□□□□□ -0.36
CACNA1A-239ENST00000637297 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
CACNA1A-239ENST00000637297 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-239ENST00000637297 POLR3GLQ9BT43 218 aa12.81□□□□□ -0.36
CACNA1A-239ENST00000637297 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-239ENST00000637297 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-239ENST00000637297 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-239ENST00000637297 PXDNQ92626 1479 aa12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 MEX3CQ5U5Q3 659 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
CACNA1A-239ENST00000637297 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-239ENST00000637297 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
CACNA1A-239ENST00000637297 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
CACNA1A-239ENST00000637297 SBNO1A3KN83 1393 aa12.78□□□□□ -0.36
CACNA1A-239ENST00000637297 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
CACNA1A-239ENST00000637297 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-239ENST00000637297 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
CACNA1A-239ENST00000637297 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
CACNA1A-239ENST00000637297 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-239ENST00000637297 ARHGEF10O15013 1369 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms