RNA–Protein interactions for RNA: ENST00000637258.1

CLCN2-218, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-218ENST00000637258 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
CLCN2-218ENST00000637258 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
CLCN2-218ENST00000637258 TRPC5Q9UL62 973 aaPredicted RBP23.74■■□□□ 1.39
CLCN2-218ENST00000637258 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
CLCN2-218ENST00000637258 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
CLCN2-218ENST00000637258 USP21Q9UK80 565 aa23.73■■□□□ 1.39
CLCN2-218ENST00000637258 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
CLCN2-218ENST00000637258 FOXD1Q16676 465 aa23.72■■□□□ 1.39
CLCN2-218ENST00000637258 ABCC11Q96J66 1382 aa23.72■■□□□ 1.39
CLCN2-218ENST00000637258 RGS12O14924 1447 aa23.72■■□□□ 1.39
CLCN2-218ENST00000637258 TECPR2O15040 1411 aa23.72■■□□□ 1.39
CLCN2-218ENST00000637258 SPATA31E1Q6ZUB1 1445 aa23.72■■□□□ 1.39
CLCN2-218ENST00000637258 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
CLCN2-218ENST00000637258 CDC42BPGQ6DT37 1551 aa23.7■■□□□ 1.38
CLCN2-218ENST00000637258 SIRT1Q96EB6 747 aa23.7■■□□□ 1.38
CLCN2-218ENST00000637258 FOXO3O43524 673 aa23.67■■□□□ 1.38
CLCN2-218ENST00000637258 STK26Q9P289 416 aa23.67■■□□□ 1.38
CLCN2-218ENST00000637258 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
CLCN2-218ENST00000637258 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
CLCN2-218ENST00000637258 MYOM2P54296 1465 aa23.65■■□□□ 1.38
CLCN2-218ENST00000637258 PXDNQ92626 1479 aa23.64■■□□□ 1.38
CLCN2-218ENST00000637258 ATAD2Q6PL18 1390 aa23.64■■□□□ 1.37
CLCN2-218ENST00000637258 PIK3C2GO75747 1445 aa23.63■■□□□ 1.37
CLCN2-218ENST00000637258 ATRNO75882 1429 aa23.63■■□□□ 1.37
CLCN2-218ENST00000637258 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
CLCN2-218ENST00000637258 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
CLCN2-218ENST00000637258 YTHDC2Q9H6S0 1430 aaKnown RBP23.59■■□□□ 1.37
CLCN2-218ENST00000637258 BCL9LQ86UU0 1499 aa23.58■■□□□ 1.37
CLCN2-218ENST00000637258 CCDC125Q86Z20 511 aa23.58■■□□□ 1.37
CLCN2-218ENST00000637258 PLEKHH1Q9ULM0 1364 aa23.57■■□□□ 1.36
CLCN2-218ENST00000637258 KNDC1Q76NI1 1749 aa23.57■■□□□ 1.36
CLCN2-218ENST00000637258 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
CLCN2-218ENST00000637258 NUTM2FA1L443 756 aa23.57■■□□□ 1.36
CLCN2-218ENST00000637258 XPCQ01831 940 aaPredicted RBP23.57■■□□□ 1.36
CLCN2-218ENST00000637258 SPATA31A3Q5VYP0 1347 aa23.57■■□□□ 1.36
CLCN2-218ENST00000637258 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
CLCN2-218ENST00000637258 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
CLCN2-218ENST00000637258 PSME1Q06323 249 aa23.54■■□□□ 1.36
CLCN2-218ENST00000637258 KRT28Q7Z3Y7 464 aa23.54■■□□□ 1.36
CLCN2-218ENST00000637258 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
CLCN2-218ENST00000637258 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
CLCN2-218ENST00000637258 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
CLCN2-218ENST00000637258 PHF8Q9UPP1 1060 aa23.51■■□□□ 1.35
CLCN2-218ENST00000637258 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
CLCN2-218ENST00000637258 FMN2Q9NZ56 1722 aa23.5■■□□□ 1.35
CLCN2-218ENST00000637258 MARF1Q9Y4F3 1742 aaKnown RBP23.49■■□□□ 1.35
CLCN2-218ENST00000637258 SLIT2O94813 1529 aa23.49■■□□□ 1.35
CLCN2-218ENST00000637258 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
CLCN2-218ENST00000637258 STAC3Q96MF2 364 aa23.46■■□□□ 1.35
CLCN2-218ENST00000637258 PRAM1Q96QH2 718 aa23.46■■□□□ 1.35
CLCN2-218ENST00000637258 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
CLCN2-218ENST00000637258 TNS3Q68CZ2 1445 aa23.44■■□□□ 1.34
CLCN2-218ENST00000637258 HAP1P54257 671 aaPredicted RBP23.44■■□□□ 1.34
CLCN2-218ENST00000637258 POGKQ9P215 609 aa23.44■■□□□ 1.34
CLCN2-218ENST00000637258 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.44■■□□□ 1.34
CLCN2-218ENST00000637258 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
CLCN2-218ENST00000637258 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
CLCN2-218ENST00000637258 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
CLCN2-218ENST00000637258 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
CLCN2-218ENST00000637258 VPS72Q15906 364 aa23.41■■□□□ 1.34
CLCN2-218ENST00000637258 RALGAPBQ86X10 1494 aa23.41■■□□□ 1.34
CLCN2-218ENST00000637258 EP400Q96L91 3159 aa23.41■■□□□ 1.34
CLCN2-218ENST00000637258 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.33
CLCN2-218ENST00000637258 USP32Q8NFA0 1604 aa23.39■■□□□ 1.33
CLCN2-218ENST00000637258 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
CLCN2-218ENST00000637258 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
CLCN2-218ENST00000637258 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
CLCN2-218ENST00000637258 HRCP23327 699 aa23.37■■□□□ 1.33
CLCN2-218ENST00000637258 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
CLCN2-218ENST00000637258 CABLES1Q8TDN4 633 aa23.36■■□□□ 1.33
CLCN2-218ENST00000637258 GLI3P10071 1580 aa23.35■■□□□ 1.33
CLCN2-218ENST00000637258 BLMP54132 1417 aaPredicted RBP23.35■■□□□ 1.33
CLCN2-218ENST00000637258 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
CLCN2-218ENST00000637258 PMFBP1Q8TBY8 1022 aa23.34■■□□□ 1.33
CLCN2-218ENST00000637258 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
CLCN2-218ENST00000637258 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
CLCN2-218ENST00000637258 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
CLCN2-218ENST00000637258 ADGRB2O60241 1585 aa23.33■■□□□ 1.33
CLCN2-218ENST00000637258 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
CLCN2-218ENST00000637258 FAM83GA6ND36 823 aa23.33■■□□□ 1.33
CLCN2-218ENST00000637258 WASLO00401 505 aaPredicted RBP23.31■■□□□ 1.32
CLCN2-218ENST00000637258 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
CLCN2-218ENST00000637258 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
CLCN2-218ENST00000637258 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
CLCN2-218ENST00000637258 CCDC9Q9Y3X0 531 aaKnown RBP23.3■■□□□ 1.32
CLCN2-218ENST00000637258 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
CLCN2-218ENST00000637258 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
CLCN2-218ENST00000637258 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
CLCN2-218ENST00000637258 MINK1Q8N4C8 1332 aaPredicted RBP23.27■■□□□ 1.32
CLCN2-218ENST00000637258 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
CLCN2-218ENST00000637258 TULP4Q9NRJ4 1543 aa23.25■■□□□ 1.31
CLCN2-218ENST00000637258 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
CLCN2-218ENST00000637258 PLEKHG5O94827 1062 aa23.24■■□□□ 1.31
CLCN2-218ENST00000637258 BTG4Q9NY30 223 aa23.24■■□□□ 1.31
CLCN2-218ENST00000637258 PLCH1Q4KWH8 1693 aa23.22■■□□□ 1.31
CLCN2-218ENST00000637258 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
CLCN2-218ENST00000637258 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
CLCN2-218ENST00000637258 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
CLCN2-218ENST00000637258 TRPM3Q9HCF6 1732 aaPredicted RBP23.21■■□□□ 1.31
CLCN2-218ENST00000637258 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms