RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
NEDD4L-238ENST00000635997 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
NEDD4L-238ENST00000635997 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
NEDD4L-238ENST00000635997 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
NEDD4L-238ENST00000635997 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
NEDD4L-238ENST00000635997 SLKQ9H2G2 1235 aaPredicted RBP17.96■□□□□ 0.47
NEDD4L-238ENST00000635997 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
NEDD4L-238ENST00000635997 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
NEDD4L-238ENST00000635997 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
NEDD4L-238ENST00000635997 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
NEDD4L-238ENST00000635997 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
NEDD4L-238ENST00000635997 DISP3Q9P2K9 1392 aa17.94■□□□□ 0.46
NEDD4L-238ENST00000635997 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 CRBNQ96SW2 442 aa17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 DAPK1P53355 1430 aa17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 UGGT2Q9NYU1 1516 aa17.93■□□□□ 0.46
NEDD4L-238ENST00000635997 E9PSI1 815 aa17.92■□□□□ 0.46
NEDD4L-238ENST00000635997 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
NEDD4L-238ENST00000635997 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
NEDD4L-238ENST00000635997 HSCBQ8IWL3 235 aa17.92■□□□□ 0.46
NEDD4L-238ENST00000635997 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
NEDD4L-238ENST00000635997 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
NEDD4L-238ENST00000635997 NOL8Q76FK4 1167 aaKnown RBP17.91■□□□□ 0.46
NEDD4L-238ENST00000635997 KIAA1107Q9UPP5 1409 aa17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 KCNA6P17658 529 aa17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 PCF11O94913 1555 aaKnown RBP17.9■□□□□ 0.46
NEDD4L-238ENST00000635997 WDR97A6NE52 1622 aa17.89■□□□□ 0.46
NEDD4L-238ENST00000635997 CCDC184Q52MB2 194 aa17.89■□□□□ 0.45
NEDD4L-238ENST00000635997 FRAT2O75474 233 aaPredicted RBP17.89■□□□□ 0.45
NEDD4L-238ENST00000635997 ZKSCAN2Q63HK3 967 aa17.89■□□□□ 0.45
NEDD4L-238ENST00000635997 HMMRO75330 724 aa17.89■□□□□ 0.45
NEDD4L-238ENST00000635997 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 NAIPQ13075 1403 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 MAP3K1Q13233 1512 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 RRP1P56182 461 aaKnown RBP17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 SLAIN2Q9P270 581 aa17.88■□□□□ 0.45
NEDD4L-238ENST00000635997 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
NEDD4L-238ENST00000635997 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
NEDD4L-238ENST00000635997 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
NEDD4L-238ENST00000635997 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
NEDD4L-238ENST00000635997 EXOC5O00471 708 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 FOXD4L1Q9NU39 408 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 NEO1Q92859 1461 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 MCCP23508 829 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 CERKQ8TCT0 537 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 CHRNA2Q15822 529 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
NEDD4L-238ENST00000635997 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
NEDD4L-238ENST00000635997 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
NEDD4L-238ENST00000635997 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
NEDD4L-238ENST00000635997 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
NEDD4L-238ENST00000635997 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
NEDD4L-238ENST00000635997 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
NEDD4L-238ENST00000635997 IL27Q8NEV9 243 aa17.83■□□□□ 0.45
NEDD4L-238ENST00000635997 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-238ENST00000635997 KDM6BO15054 1643 aa17.83■□□□□ 0.44
NEDD4L-238ENST00000635997 PTMAP06454 111 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-238ENST00000635997 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
NEDD4L-238ENST00000635997 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
NEDD4L-238ENST00000635997 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 C9orf78Q9NZ63 289 aaPredicted RBP17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
NEDD4L-238ENST00000635997 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
NEDD4L-238ENST00000635997 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-238ENST00000635997 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 CHD1O14646 1710 aa17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 SLC4A3P48751 1232 aa17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
NEDD4L-238ENST00000635997 YEATS2Q9ULM3 1422 aa17.79■□□□□ 0.44
NEDD4L-238ENST00000635997 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
NEDD4L-238ENST00000635997 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-238ENST00000635997 ABCC5O15440 1437 aa17.79■□□□□ 0.44
NEDD4L-238ENST00000635997 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 TSR2Q969E8 191 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 RIMS2Q9UQ26 1411 aa17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 CABP4P57796 275 aa17.78■□□□□ 0.44
NEDD4L-238ENST00000635997 TOMM22Q9NS69 142 aa17.77■□□□□ 0.44
NEDD4L-238ENST00000635997 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-238ENST00000635997 NEXNQ0ZGT2 675 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms