RNA–Protein interactions for RNA: ENST00000635945.1

SCN2A-208, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 3,119 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-208ENST00000635945 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
SCN2A-208ENST00000635945 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
SCN2A-208ENST00000635945 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
SCN2A-208ENST00000635945 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
SCN2A-208ENST00000635945 PRAG1Q86YV5 1406 aa9.44□□□□□ -0.9
SCN2A-208ENST00000635945 RAPGEF6Q8TEU7 1601 aa9.44□□□□□ -0.9
SCN2A-208ENST00000635945 COL17A1Q9UMD9 1497 aaPredicted RBP9.44□□□□□ -0.9
SCN2A-208ENST00000635945 SENP3Q9H4L4 574 aaPredicted RBP9.44□□□□□ -0.9
SCN2A-208ENST00000635945 CCDC144AA2RUR9 1427 aa9.44□□□□□ -0.9
SCN2A-208ENST00000635945 ZCCHC11Q5TAX3 1644 aaKnown RBP9.43□□□□□ -0.9
SCN2A-208ENST00000635945 CCDC173Q0VFZ6 552 aa9.43□□□□□ -0.9
SCN2A-208ENST00000635945 PKP1Q13835 747 aa9.43□□□□□ -0.9
SCN2A-208ENST00000635945 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.43□□□□□ -0.9
SCN2A-208ENST00000635945 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
SCN2A-208ENST00000635945 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
SCN2A-208ENST00000635945 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
SCN2A-208ENST00000635945 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
SCN2A-208ENST00000635945 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
SCN2A-208ENST00000635945 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
SCN2A-208ENST00000635945 CBX1P83916 185 aa9.42□□□□□ -0.9
SCN2A-208ENST00000635945 RAB3GAP1Q15042 981 aa9.41□□□□□ -0.9
SCN2A-208ENST00000635945 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
SCN2A-208ENST00000635945 CARMIL2Q6F5E8 1435 aa9.41□□□□□ -0.9
SCN2A-208ENST00000635945 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
SCN2A-208ENST00000635945 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
SCN2A-208ENST00000635945 MAP3K4Q9Y6R4 1608 aa9.41□□□□□ -0.9
SCN2A-208ENST00000635945 FBLN2P98095 1184 aa9.4□□□□□ -0.9
SCN2A-208ENST00000635945 MAPK8IP2Q13387 824 aaPredicted RBP9.4□□□□□ -0.9
SCN2A-208ENST00000635945 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SCN2A-208ENST00000635945 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
SCN2A-208ENST00000635945 PPRC1Q5VV67 1664 aaKnown RBP9.4□□□□□ -0.9
SCN2A-208ENST00000635945 ZNF830Q96NB3 372 aaPredicted RBP9.4□□□□□ -0.9
SCN2A-208ENST00000635945 MVPQ14764 893 aaKnown RBP9.4□□□□□ -0.91
SCN2A-208ENST00000635945 C17orf53Q8N3J3 647 aaPredicted RBP9.4□□□□□ -0.91
SCN2A-208ENST00000635945 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.91
SCN2A-208ENST00000635945 INSRP06213 1382 aa9.39□□□□□ -0.91
SCN2A-208ENST00000635945 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
SCN2A-208ENST00000635945 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
SCN2A-208ENST00000635945 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
SCN2A-208ENST00000635945 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
SCN2A-208ENST00000635945 BAG4O95429 457 aaKnown RBP9.39□□□□□ -0.91
SCN2A-208ENST00000635945 DDIT3P35638 169 aa9.39□□□□□ -0.91
SCN2A-208ENST00000635945 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
SCN2A-208ENST00000635945 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
SCN2A-208ENST00000635945 ARHGEF12Q9NZN5 1544 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 ZSCAN23Q3MJ62 389 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 CARD14Q9BXL6 1004 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 A2MP01023 1474 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 KDM5DQ9BY66 1539 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 PTMAP06454 111 aaKnown RBP9.38□□□□□ -0.91
SCN2A-208ENST00000635945 FGD1P98174 961 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
SCN2A-208ENST00000635945 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 KIF2CQ99661 725 aa9.38□□□□□ -0.91
SCN2A-208ENST00000635945 SYCE3A1L190 88 aa9.37□□□□□ -0.91
SCN2A-208ENST00000635945 TRIM27P14373 513 aa9.37□□□□□ -0.91
SCN2A-208ENST00000635945 ANKRD45Q5TZF3 282 aa9.37□□□□□ -0.91
SCN2A-208ENST00000635945 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
SCN2A-208ENST00000635945 TRPM1Q7Z4N2 1603 aa9.37□□□□□ -0.91
SCN2A-208ENST00000635945 ZKSCAN2Q63HK3 967 aa9.37□□□□□ -0.91
SCN2A-208ENST00000635945 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 EXOSC9Q06265 439 aaKnown RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
SCN2A-208ENST00000635945 JPH4Q96JJ6 628 aa9.36□□□□□ -0.91
SCN2A-208ENST00000635945 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 ISY1Q9ULR0 285 aaKnown RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 ABCA9Q8IUA7 1624 aa9.36□□□□□ -0.91
SCN2A-208ENST00000635945 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
SCN2A-208ENST00000635945 NOB1Q9ULX3 412 aaKnown RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
SCN2A-208ENST00000635945 APBB1O00213 710 aa9.35□□□□□ -0.91
SCN2A-208ENST00000635945 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
SCN2A-208ENST00000635945 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
SCN2A-208ENST00000635945 SSH1Q8WYL5 1049 aa9.35□□□□□ -0.91
SCN2A-208ENST00000635945 ZBTB22O15209 634 aa9.35□□□□□ -0.91
SCN2A-208ENST00000635945 U2AF1L5P0DN76 240 aaPredicted RBP9.35□□□□□ -0.91
SCN2A-208ENST00000635945 U2AF1Q01081 240 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCN2A-208ENST00000635945 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
SCN2A-208ENST00000635945 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
SCN2A-208ENST00000635945 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 ARAP3Q8WWN8 1544 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 PLEKHD1A6NEE1 506 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
SCN2A-208ENST00000635945 ZSCAN20P17040 1043 aaPredicted RBP9.34□□□□□ -0.92
SCN2A-208ENST00000635945 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.92
SCN2A-208ENST00000635945 SMAP1Q8IYB5 467 aaPredicted RBP9.34□□□□□ -0.92
SCN2A-208ENST00000635945 GPT2Q8TD30 523 aa9.34□□□□□ -0.92
SCN2A-208ENST00000635945 TROQ12816 1431 aaPredicted RBP9.33□□□□□ -0.92
SCN2A-208ENST00000635945 FAM135AQ9P2D6 1515 aa9.33□□□□□ -0.92
SCN2A-208ENST00000635945 PLA2R1Q13018 1463 aa9.33□□□□□ -0.92
SCN2A-208ENST00000635945 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
SCN2A-208ENST00000635945 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
SCN2A-208ENST00000635945 MTHFSP49914 203 aa9.33□□□□□ -0.92
SCN2A-208ENST00000635945 ATP2B3Q16720 1220 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms