RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 WASHC2AQ641Q2 1341 aa11.38□□□□□ -0.59
CACNB4-217ENST00000635904 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
CACNB4-217ENST00000635904 POGKQ9P215 609 aa11.37□□□□□ -0.59
CACNB4-217ENST00000635904 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
CACNB4-217ENST00000635904 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
CACNB4-217ENST00000635904 CCDC7Q96M83 1385 aa11.36□□□□□ -0.59
CACNB4-217ENST00000635904 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
CACNB4-217ENST00000635904 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
CACNB4-217ENST00000635904 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
CACNB4-217ENST00000635904 TMF1P82094 1093 aa11.35□□□□□ -0.59
CACNB4-217ENST00000635904 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
CACNB4-217ENST00000635904 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
CACNB4-217ENST00000635904 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
CACNB4-217ENST00000635904 ADGRL3Q9HAR2 1447 aa11.33□□□□□ -0.6
CACNB4-217ENST00000635904 MYOM1P52179 1685 aa11.33□□□□□ -0.6
CACNB4-217ENST00000635904 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
CACNB4-217ENST00000635904 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
CACNB4-217ENST00000635904 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
CACNB4-217ENST00000635904 LRRC7Q96NW7 1537 aa11.31□□□□□ -0.6
CACNB4-217ENST00000635904 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
CACNB4-217ENST00000635904 WASLO00401 505 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-217ENST00000635904 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-217ENST00000635904 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 ATP7BP35670 1465 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 USP32Q8NFA0 1604 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
CACNB4-217ENST00000635904 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
CACNB4-217ENST00000635904 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
CACNB4-217ENST00000635904 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
CACNB4-217ENST00000635904 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
CACNB4-217ENST00000635904 TOPAZ1Q8N9V7 1692 aa11.28□□□□□ -0.6
CACNB4-217ENST00000635904 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
CACNB4-217ENST00000635904 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
CACNB4-217ENST00000635904 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.6
CACNB4-217ENST00000635904 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
CACNB4-217ENST00000635904 DCCP43146 1447 aa11.26□□□□□ -0.61
CACNB4-217ENST00000635904 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
CACNB4-217ENST00000635904 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
CACNB4-217ENST00000635904 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
CACNB4-217ENST00000635904 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
CACNB4-217ENST00000635904 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
CACNB4-217ENST00000635904 NUDT16Q96DE0 195 aaKnown RBP11.25□□□□□ -0.61
CACNB4-217ENST00000635904 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
CACNB4-217ENST00000635904 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
CACNB4-217ENST00000635904 NINLQ9Y2I6 1382 aa11.24□□□□□ -0.61
CACNB4-217ENST00000635904 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
CACNB4-217ENST00000635904 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
CACNB4-217ENST00000635904 MSH6P52701 1360 aa11.23□□□□□ -0.61
CACNB4-217ENST00000635904 MST1RQ04912 1400 aa11.23□□□□□ -0.61
CACNB4-217ENST00000635904 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
CACNB4-217ENST00000635904 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
CACNB4-217ENST00000635904 PANK3Q9H999 370 aa11.22□□□□□ -0.61
CACNB4-217ENST00000635904 A0A1W2PP64 1363 aa11.22□□□□□ -0.61
CACNB4-217ENST00000635904 ANKRD36BQ8N2N9 1353 aa11.22□□□□□ -0.61
CACNB4-217ENST00000635904 C1orf167Q5SNV9 1468 aa11.21□□□□□ -0.61
CACNB4-217ENST00000635904 CPSF1Q10570 1443 aaKnown RBP11.21□□□□□ -0.61
CACNB4-217ENST00000635904 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
CACNB4-217ENST00000635904 AKAP12Q02952 1782 aa11.21□□□□□ -0.62
CACNB4-217ENST00000635904 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
CACNB4-217ENST00000635904 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
CACNB4-217ENST00000635904 MON2Q7Z3U7 1717 aa11.2□□□□□ -0.62
CACNB4-217ENST00000635904 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
CACNB4-217ENST00000635904 ATF3P18847 181 aa11.2□□□□□ -0.62
CACNB4-217ENST00000635904 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
CACNB4-217ENST00000635904 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
CACNB4-217ENST00000635904 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
CACNB4-217ENST00000635904 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
CACNB4-217ENST00000635904 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
CACNB4-217ENST00000635904 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
CACNB4-217ENST00000635904 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
CACNB4-217ENST00000635904 ACEP12821 1306 aa11.17□□□□□ -0.62
CACNB4-217ENST00000635904 KIF1AQ12756 1690 aa11.17□□□□□ -0.62
CACNB4-217ENST00000635904 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
CACNB4-217ENST00000635904 USP6P35125 1406 aa11.16□□□□□ -0.62
CACNB4-217ENST00000635904 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
CACNB4-217ENST00000635904 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
CACNB4-217ENST00000635904 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
CACNB4-217ENST00000635904 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.62
CACNB4-217ENST00000635904 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
CACNB4-217ENST00000635904 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
CACNB4-217ENST00000635904 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
CACNB4-217ENST00000635904 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
CACNB4-217ENST00000635904 IQSEC2Q5JU85 1478 aa11.15□□□□□ -0.62
CACNB4-217ENST00000635904 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
CACNB4-217ENST00000635904 BRINP3Q76B58 766 aa11.14□□□□□ -0.63
CACNB4-217ENST00000635904 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
CACNB4-217ENST00000635904 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
CACNB4-217ENST00000635904 NPC1L1Q9UHC9 1359 aa11.14□□□□□ -0.63
CACNB4-217ENST00000635904 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
CACNB4-217ENST00000635904 FOXO3O43524 673 aa11.13□□□□□ -0.63
CACNB4-217ENST00000635904 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
CACNB4-217ENST00000635904 ROBO1Q9Y6N7 1651 aa11.12□□□□□ -0.63
CACNB4-217ENST00000635904 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
CACNB4-217ENST00000635904 PARD3Q8TEW0 1356 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 ANKRD26Q9UPS8 1709 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms