RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-209ENST00000635885 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
SYNGAP1-209ENST00000635885 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-209ENST00000635885 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
SYNGAP1-209ENST00000635885 PTPRMP28827 1452 aa13.71□□□□□ -0.21
SYNGAP1-209ENST00000635885 MORC1Q86VD1 984 aa13.7□□□□□ -0.22
SYNGAP1-209ENST00000635885 MLECQ14165 292 aa13.69□□□□□ -0.22
SYNGAP1-209ENST00000635885 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-209ENST00000635885 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
SYNGAP1-209ENST00000635885 CCDC146Q8IYE0 955 aa13.68□□□□□ -0.22
SYNGAP1-209ENST00000635885 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
SYNGAP1-209ENST00000635885 STK26Q9P289 416 aa13.68□□□□□ -0.22
SYNGAP1-209ENST00000635885 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
SYNGAP1-209ENST00000635885 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SYNGAP1-209ENST00000635885 NSD2O96028 1365 aa13.67□□□□□ -0.22
SYNGAP1-209ENST00000635885 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 TRMT2AQ8IZ69 625 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 NINLQ9Y2I6 1382 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 KIF20BQ96Q89 1820 aa13.66□□□□□ -0.22
SYNGAP1-209ENST00000635885 RIMS2Q9UQ26 1411 aa13.65□□□□□ -0.22
SYNGAP1-209ENST00000635885 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
SYNGAP1-209ENST00000635885 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
SYNGAP1-209ENST00000635885 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
SYNGAP1-209ENST00000635885 APAF1O14727 1248 aa13.64□□□□□ -0.23
SYNGAP1-209ENST00000635885 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNGAP1-209ENST00000635885 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-209ENST00000635885 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
SYNGAP1-209ENST00000635885 POGKQ9P215 609 aa13.63□□□□□ -0.23
SYNGAP1-209ENST00000635885 NRXN3Q9Y4C0 1643 aa13.63□□□□□ -0.23
SYNGAP1-209ENST00000635885 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-209ENST00000635885 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
SYNGAP1-209ENST00000635885 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
SYNGAP1-209ENST00000635885 PLIN1O60240 522 aa13.62□□□□□ -0.23
SYNGAP1-209ENST00000635885 CRBNQ96SW2 442 aa13.62□□□□□ -0.23
SYNGAP1-209ENST00000635885 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
SYNGAP1-209ENST00000635885 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-209ENST00000635885 A0A1W2PP64 1363 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 MTHFSP49914 203 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 CFAP53Q96M91 514 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
SYNGAP1-209ENST00000635885 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
SYNGAP1-209ENST00000635885 E9PSI1 815 aa13.59□□□□□ -0.23
SYNGAP1-209ENST00000635885 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-209ENST00000635885 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
SYNGAP1-209ENST00000635885 MED14O60244 1454 aa13.59□□□□□ -0.23
SYNGAP1-209ENST00000635885 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 CDK19Q9BWU1 502 aa13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 TNRQ92752 1358 aa13.58□□□□□ -0.24
SYNGAP1-209ENST00000635885 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
SYNGAP1-209ENST00000635885 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-209ENST00000635885 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
SYNGAP1-209ENST00000635885 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
SYNGAP1-209ENST00000635885 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-209ENST00000635885 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 FYB1O15117 783 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 MSH5O43196 834 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 TCP11L2Q8N4U5 519 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 PHF23Q9BUL5 403 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 ATP7BP35670 1465 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
SYNGAP1-209ENST00000635885 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 WDR63Q8IWG1 891 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 SIRT1Q96EB6 747 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 CABP1Q9NZU7 370 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 MON2Q7Z3U7 1717 aa13.52□□□□□ -0.25
SYNGAP1-209ENST00000635885 CPS1P31327 1500 aa13.51□□□□□ -0.25
SYNGAP1-209ENST00000635885 MYT1Q01538 1121 aa13.51□□□□□ -0.25
SYNGAP1-209ENST00000635885 RRP7AQ9Y3A4 280 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-209ENST00000635885 METP08581 1390 aa13.5□□□□□ -0.25
SYNGAP1-209ENST00000635885 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-209ENST00000635885 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
SYNGAP1-209ENST00000635885 TECPR2O15040 1411 aa13.49□□□□□ -0.25
SYNGAP1-209ENST00000635885 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
SYNGAP1-209ENST00000635885 C3P01024 1663 aa13.49□□□□□ -0.25
SYNGAP1-209ENST00000635885 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 BCAR3O75815 825 aa13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 MS4A1P11836 297 aa13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
SYNGAP1-209ENST00000635885 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms