RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
CLN5-204ENST00000635761 POTEMA6NI47 508 aa11.68□□□□□ -0.54
CLN5-204ENST00000635761 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
CLN5-204ENST00000635761 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
CLN5-204ENST00000635761 FYCO1Q9BQS8 1478 aa11.68□□□□□ -0.54
CLN5-204ENST00000635761 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
CLN5-204ENST00000635761 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
CLN5-204ENST00000635761 EPAS1Q99814 870 aa11.67□□□□□ -0.54
CLN5-204ENST00000635761 UHRF1BP1Q6BDS2 1440 aa11.67□□□□□ -0.54
CLN5-204ENST00000635761 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
CLN5-204ENST00000635761 PCDHGA10Q9Y5H3 936 aa11.66□□□□□ -0.54
CLN5-204ENST00000635761 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
CLN5-204ENST00000635761 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.54
CLN5-204ENST00000635761 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
CLN5-204ENST00000635761 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
CLN5-204ENST00000635761 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
CLN5-204ENST00000635761 PTPRTO14522 1441 aa11.64□□□□□ -0.55
CLN5-204ENST00000635761 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
CLN5-204ENST00000635761 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
CLN5-204ENST00000635761 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
CLN5-204ENST00000635761 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
CLN5-204ENST00000635761 PLXNC1O60486 1568 aa11.63□□□□□ -0.55
CLN5-204ENST00000635761 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
CLN5-204ENST00000635761 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
CLN5-204ENST00000635761 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
CLN5-204ENST00000635761 CNTLNQ9NXG0 1405 aa11.62□□□□□ -0.55
CLN5-204ENST00000635761 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
CLN5-204ENST00000635761 MYO3AQ8NEV4 1616 aa11.62□□□□□ -0.55
CLN5-204ENST00000635761 ZNF687Q8N1G0 1237 aa11.62□□□□□ -0.55
CLN5-204ENST00000635761 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
CLN5-204ENST00000635761 CFAP65Q6ZU64 1925 aaKnown RBP11.62□□□□□ -0.55
CLN5-204ENST00000635761 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
CLN5-204ENST00000635761 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
CLN5-204ENST00000635761 BCANQ96GW7 911 aa11.61□□□□□ -0.55
CLN5-204ENST00000635761 OSBPP22059 807 aa11.6□□□□□ -0.55
CLN5-204ENST00000635761 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLN5-204ENST00000635761 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
CLN5-204ENST00000635761 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CLN5-204ENST00000635761 NPATQ14207 1427 aa11.6□□□□□ -0.55
CLN5-204ENST00000635761 PBX2P40425 430 aa11.59□□□□□ -0.55
CLN5-204ENST00000635761 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
CLN5-204ENST00000635761 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
CLN5-204ENST00000635761 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
CLN5-204ENST00000635761 KIAA1107Q9UPP5 1409 aa11.59□□□□□ -0.55
CLN5-204ENST00000635761 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
CLN5-204ENST00000635761 PLEKHH2Q8IVE3 1493 aa11.58□□□□□ -0.56
CLN5-204ENST00000635761 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
CLN5-204ENST00000635761 TIAM1Q13009 1591 aa11.58□□□□□ -0.56
CLN5-204ENST00000635761 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
CLN5-204ENST00000635761 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CLN5-204ENST00000635761 A2MP01023 1474 aa11.57□□□□□ -0.56
CLN5-204ENST00000635761 MAP3K7O43318 606 aa11.56□□□□□ -0.56
CLN5-204ENST00000635761 CEP170BQ9Y4F5 1589 aaPredicted RBP11.56□□□□□ -0.56
CLN5-204ENST00000635761 PTPREP23469 700 aa11.55□□□□□ -0.56
CLN5-204ENST00000635761 CFDP1Q9UEE9 299 aaPredicted RBP11.55□□□□□ -0.56
CLN5-204ENST00000635761 DNMT1P26358 1616 aaKnown RBP11.55□□□□□ -0.56
CLN5-204ENST00000635761 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
CLN5-204ENST00000635761 ARHGAP33O14559 1287 aa11.54□□□□□ -0.56
CLN5-204ENST00000635761 PRIM1P49642 420 aaKnown RBP11.54□□□□□ -0.56
CLN5-204ENST00000635761 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
CLN5-204ENST00000635761 PTPRKQ15262 1439 aa11.53□□□□□ -0.56
CLN5-204ENST00000635761 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
CLN5-204ENST00000635761 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
CLN5-204ENST00000635761 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
CLN5-204ENST00000635761 C6orf132Q5T0Z8 1188 aa11.52□□□□□ -0.57
CLN5-204ENST00000635761 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
CLN5-204ENST00000635761 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
CLN5-204ENST00000635761 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
CLN5-204ENST00000635761 SPATA31D1Q6ZQQ2 1576 aa11.51□□□□□ -0.57
CLN5-204ENST00000635761 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
CLN5-204ENST00000635761 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
CLN5-204ENST00000635761 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
CLN5-204ENST00000635761 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
CLN5-204ENST00000635761 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
CLN5-204ENST00000635761 GGT6Q6P531 493 aa11.5□□□□□ -0.57
CLN5-204ENST00000635761 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
CLN5-204ENST00000635761 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
CLN5-204ENST00000635761 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
CLN5-204ENST00000635761 PSEN2P49810 448 aa11.49□□□□□ -0.57
CLN5-204ENST00000635761 RBM26Q5T8P6 1007 aaKnown RBP11.49□□□□□ -0.57
CLN5-204ENST00000635761 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
CLN5-204ENST00000635761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLN5-204ENST00000635761 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
CLN5-204ENST00000635761 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
CLN5-204ENST00000635761 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
CLN5-204ENST00000635761 ARHGEF5Q12774 1597 aa11.47□□□□□ -0.57
CLN5-204ENST00000635761 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
CLN5-204ENST00000635761 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
CLN5-204ENST00000635761 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
CLN5-204ENST00000635761 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
CLN5-204ENST00000635761 CEP152O94986 1710 aa11.46□□□□□ -0.57
CLN5-204ENST00000635761 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.57
CLN5-204ENST00000635761 FAM135AQ9P2D6 1515 aa11.46□□□□□ -0.57
CLN5-204ENST00000635761 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLN5-204ENST00000635761 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
CLN5-204ENST00000635761 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
CLN5-204ENST00000635761 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.57
CLN5-204ENST00000635761 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.58
CLN5-204ENST00000635761 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
CLN5-204ENST00000635761 SOCS7O14512 581 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms