RNA–Protein interactions for RNA: ENST00000635347.1

SPOCK1-211, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-211ENST00000635347 TRPC5Q9UL62 973 aaPredicted RBP11.65□□□□□ -0.54
SPOCK1-211ENST00000635347 MST1RQ04912 1400 aa11.65□□□□□ -0.54
SPOCK1-211ENST00000635347 PRAG1Q86YV5 1406 aa11.64□□□□□ -0.55
SPOCK1-211ENST00000635347 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
SPOCK1-211ENST00000635347 DDX17Q92841 729 aaKnown RBP11.64□□□□□ -0.55
SPOCK1-211ENST00000635347 EP400Q96L91 3159 aa11.64□□□□□ -0.55
SPOCK1-211ENST00000635347 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
SPOCK1-211ENST00000635347 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
SPOCK1-211ENST00000635347 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
SPOCK1-211ENST00000635347 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
SPOCK1-211ENST00000635347 ATRNO75882 1429 aa11.6□□□□□ -0.55
SPOCK1-211ENST00000635347 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
SPOCK1-211ENST00000635347 FMN2Q9NZ56 1722 aa11.59□□□□□ -0.55
SPOCK1-211ENST00000635347 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
SPOCK1-211ENST00000635347 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
SPOCK1-211ENST00000635347 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
SPOCK1-211ENST00000635347 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
SPOCK1-211ENST00000635347 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 RGPD8O14715 1765 aaPredicted RBP11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 RGL3Q3MIN7 710 aa11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 PIK3C2GO75747 1445 aa11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 MYOM2P54296 1465 aa11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 LRP5O75197 1615 aa11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
SPOCK1-211ENST00000635347 TECPR2O15040 1411 aa11.56□□□□□ -0.56
SPOCK1-211ENST00000635347 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
SPOCK1-211ENST00000635347 BCL9LQ86UU0 1499 aa11.56□□□□□ -0.56
SPOCK1-211ENST00000635347 RAB3GAP2Q9H2M9 1393 aa11.55□□□□□ -0.56
SPOCK1-211ENST00000635347 DEFB132Q7Z7B7 95 aa11.55□□□□□ -0.56
SPOCK1-211ENST00000635347 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
SPOCK1-211ENST00000635347 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
SPOCK1-211ENST00000635347 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
SPOCK1-211ENST00000635347 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.56
SPOCK1-211ENST00000635347 ORAI2Q96SN7 254 aa11.52□□□□□ -0.57
SPOCK1-211ENST00000635347 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
SPOCK1-211ENST00000635347 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
SPOCK1-211ENST00000635347 STK26Q9P289 416 aa11.51□□□□□ -0.57
SPOCK1-211ENST00000635347 ITSN1Q15811 1721 aa11.51□□□□□ -0.57
SPOCK1-211ENST00000635347 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
SPOCK1-211ENST00000635347 ABCC11Q96J66 1382 aa11.51□□□□□ -0.57
SPOCK1-211ENST00000635347 HRCP23327 699 aa11.5□□□□□ -0.57
SPOCK1-211ENST00000635347 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
SPOCK1-211ENST00000635347 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.49□□□□□ -0.57
SPOCK1-211ENST00000635347 SF3B2Q13435 895 aaKnown RBP11.49□□□□□ -0.57
SPOCK1-211ENST00000635347 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
SPOCK1-211ENST00000635347 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
SPOCK1-211ENST00000635347 PXDNQ92626 1479 aa11.48□□□□□ -0.57
SPOCK1-211ENST00000635347 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 GLI3P10071 1580 aa11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 UNC5CLQ8IV45 518 aa11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 C14orf93Q9H972 538 aaKnown RBP11.47□□□□□ -0.57
SPOCK1-211ENST00000635347 BRWD3Q6RI45 1802 aa11.46□□□□□ -0.57
SPOCK1-211ENST00000635347 ABCA3Q99758 1704 aa11.46□□□□□ -0.57
SPOCK1-211ENST00000635347 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
SPOCK1-211ENST00000635347 WAPLQ7Z5K2 1190 aa11.46□□□□□ -0.57
SPOCK1-211ENST00000635347 SIRT1Q96EB6 747 aa11.46□□□□□ -0.57
SPOCK1-211ENST00000635347 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 USP32Q8NFA0 1604 aa11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 SLIT2O94813 1529 aa11.45□□□□□ -0.58
SPOCK1-211ENST00000635347 EIF3AQ14152 1382 aaKnown RBP11.44□□□□□ -0.58
SPOCK1-211ENST00000635347 NWD2Q9ULI1 1742 aa11.44□□□□□ -0.58
SPOCK1-211ENST00000635347 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
SPOCK1-211ENST00000635347 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
SPOCK1-211ENST00000635347 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
SPOCK1-211ENST00000635347 FOXO3O43524 673 aa11.43□□□□□ -0.58
SPOCK1-211ENST00000635347 BAG6P46379 1132 aa11.43□□□□□ -0.58
SPOCK1-211ENST00000635347 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
SPOCK1-211ENST00000635347 POGKQ9P215 609 aa11.43□□□□□ -0.58
SPOCK1-211ENST00000635347 ANKARQ7Z5J8 1434 aa11.43□□□□□ -0.58
SPOCK1-211ENST00000635347 KRT27Q7Z3Y8 459 aa11.42□□□□□ -0.58
SPOCK1-211ENST00000635347 TRPM3Q9HCF6 1732 aaPredicted RBP11.41□□□□□ -0.58
SPOCK1-211ENST00000635347 YY1P25490 414 aa11.41□□□□□ -0.58
SPOCK1-211ENST00000635347 PSME1Q06323 249 aa11.41□□□□□ -0.58
SPOCK1-211ENST00000635347 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
SPOCK1-211ENST00000635347 TNS3Q68CZ2 1445 aa11.41□□□□□ -0.58
SPOCK1-211ENST00000635347 TULP4Q9NRJ4 1543 aa11.4□□□□□ -0.58
SPOCK1-211ENST00000635347 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
SPOCK1-211ENST00000635347 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
SPOCK1-211ENST00000635347 VPS72Q15906 364 aa11.4□□□□□ -0.58
SPOCK1-211ENST00000635347 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
SPOCK1-211ENST00000635347 ALS2Q96Q42 1657 aa11.4□□□□□ -0.59
SPOCK1-211ENST00000635347 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPOCK1-211ENST00000635347 R3HDM1Q15032 1099 aaKnown RBP11.39□□□□□ -0.59
SPOCK1-211ENST00000635347 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
SPOCK1-211ENST00000635347 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
SPOCK1-211ENST00000635347 SPATA31A3Q5VYP0 1347 aa11.38□□□□□ -0.59
SPOCK1-211ENST00000635347 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
SPOCK1-211ENST00000635347 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
SPOCK1-211ENST00000635347 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
SPOCK1-211ENST00000635347 ARHGEF10O15013 1369 aa11.38□□□□□ -0.59
SPOCK1-211ENST00000635347 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
SPOCK1-211ENST00000635347 SBNO1A3KN83 1393 aa11.37□□□□□ -0.59
SPOCK1-211ENST00000635347 CRYBG1Q9Y4K1 1723 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms