RNA–Protein interactions for RNA: ENST00000635164.1

NRXN1-239, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-239ENST00000635164 MCM4P33991 863 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 RBM42Q9BTD8 480 aaKnown RBP9.39□□□□□ -0.91
NRXN1-239ENST00000635164 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 RIPK4P57078 832 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
NRXN1-239ENST00000635164 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
NRXN1-239ENST00000635164 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 ZNF521Q96K83 1311 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 MPNDQ8N594 471 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 CCDC141Q6ZP82 1450 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
NRXN1-239ENST00000635164 CAPN15O75808 1086 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
NRXN1-239ENST00000635164 TRIM27P14373 513 aa9.37□□□□□ -0.91
NRXN1-239ENST00000635164 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
NRXN1-239ENST00000635164 RSPH6AQ9H0K4 717 aa9.37□□□□□ -0.91
NRXN1-239ENST00000635164 NSD3Q9BZ95 1437 aa9.37□□□□□ -0.91
NRXN1-239ENST00000635164 MVPQ14764 893 aaKnown RBP9.37□□□□□ -0.91
NRXN1-239ENST00000635164 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
NRXN1-239ENST00000635164 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
NRXN1-239ENST00000635164 CHMP5Q9NZZ3 219 aa9.36□□□□□ -0.91
NRXN1-239ENST00000635164 EIF3AQ14152 1382 aaKnown RBP9.36□□□□□ -0.91
NRXN1-239ENST00000635164 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
NRXN1-239ENST00000635164 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
NRXN1-239ENST00000635164 ZMYM4Q5VZL5 1548 aa9.35□□□□□ -0.91
NRXN1-239ENST00000635164 SCAPERQ9BY12 1400 aa9.35□□□□□ -0.91
NRXN1-239ENST00000635164 ANP32BQ92688 251 aaKnown RBP9.34□□□□□ -0.91
NRXN1-239ENST00000635164 KANK1Q14678 1352 aa9.34□□□□□ -0.91
NRXN1-239ENST00000635164 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
NRXN1-239ENST00000635164 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
NRXN1-239ENST00000635164 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
NRXN1-239ENST00000635164 HSP90AA2PQ14568 343 aaPredicted RBP9.33□□□□□ -0.92
NRXN1-239ENST00000635164 CHAMP1Q96JM3 812 aa9.33□□□□□ -0.92
NRXN1-239ENST00000635164 MLECQ14165 292 aa9.33□□□□□ -0.92
NRXN1-239ENST00000635164 ARHGEF12Q9NZN5 1544 aa9.33□□□□□ -0.92
NRXN1-239ENST00000635164 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
NRXN1-239ENST00000635164 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
NRXN1-239ENST00000635164 WDR7Q9Y4E6 1490 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 GRPEL1Q9HAV7 217 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 TRAPPC8Q9Y2L5 1435 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 RBM10P98175 930 aaKnown RBP9.32□□□□□ -0.92
NRXN1-239ENST00000635164 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
NRXN1-239ENST00000635164 DDX19BQ9UMR2 479 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 PBRM1Q86U86 1689 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 GPRASP1Q5JY77 1395 aa9.32□□□□□ -0.92
NRXN1-239ENST00000635164 DTNBO60941 627 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 TMPOP42166 694 aaKnown RBP9.31□□□□□ -0.92
NRXN1-239ENST00000635164 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
NRXN1-239ENST00000635164 SSFA2P28290 1259 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 ANTXR1Q9H6X2 564 aa9.31□□□□□ -0.92
NRXN1-239ENST00000635164 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
NRXN1-239ENST00000635164 CD2BP2O95400 341 aaKnown RBP9.3□□□□□ -0.92
NRXN1-239ENST00000635164 RNF214Q8ND24 703 aa9.3□□□□□ -0.92
NRXN1-239ENST00000635164 GOLGA6L22H0YM25 854 aa9.3□□□□□ -0.92
NRXN1-239ENST00000635164 GBP4Q96PP9 640 aa9.3□□□□□ -0.92
NRXN1-239ENST00000635164 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
NRXN1-239ENST00000635164 IPO8O15397 1037 aaKnown RBP9.3□□□□□ -0.92
NRXN1-239ENST00000635164 ASXL1Q8IXJ9 1541 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 FAM83GA6ND36 823 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 CAVIN1Q6NZI2 390 aaKnown RBP9.29□□□□□ -0.92
NRXN1-239ENST00000635164 GAS2L3Q86XJ1 694 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 C16orf71Q8IYS4 520 aaPredicted RBP9.29□□□□□ -0.92
NRXN1-239ENST00000635164 TSPYL6Q8N831 410 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 ESPNB1AK53 854 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 SMARCA5O60264 1052 aaPredicted RBP9.29□□□□□ -0.92
NRXN1-239ENST00000635164 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
NRXN1-239ENST00000635164 GLIPR1L2Q4G1C9 344 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 CHD1LQ86WJ1 897 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 WDR63Q8IWG1 891 aa9.29□□□□□ -0.92
NRXN1-239ENST00000635164 ABCC10Q5T3U5 1492 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 MRE11P49959 708 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 TSHZ3Q63HK5 1081 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 CABP1Q9NZU7 370 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
NRXN1-239ENST00000635164 PRAM1Q96QH2 718 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 EVC2Q86UK5 1308 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 DDX11L8A8MPP1 907 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 KRT24Q2M2I5 525 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 FAM13BQ9NYF5 915 aa9.28□□□□□ -0.92
NRXN1-239ENST00000635164 ZNF219Q9P2Y4 722 aaPredicted RBP9.28□□□□□ -0.92
NRXN1-239ENST00000635164 MSNP26038 577 aaKnown RBP9.27□□□□□ -0.93
NRXN1-239ENST00000635164 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
NRXN1-239ENST00000635164 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
NRXN1-239ENST00000635164 ATF5Q9Y2D1 282 aaPredicted RBP9.27□□□□□ -0.93
NRXN1-239ENST00000635164 NOS1P29475 1434 aa9.27□□□□□ -0.93
NRXN1-239ENST00000635164 ITSN2Q9NZM3 1697 aa9.27□□□□□ -0.93
NRXN1-239ENST00000635164 RRS1Q15050 365 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms