RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 FKBP5Q13451 457 aaPredicted RBP11□□□□□ -0.65
CSMD1-218ENST00000635120 TTLL5Q6EMB2 1281 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 ERICH2A1L162 156 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 CDR1P51861 262 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 LNPKQ9C0E8 428 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 OLFM4Q6UX06 510 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 ODF2Q5BJF6 829 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 MSH5O43196 834 aa10.99□□□□□ -0.65
CSMD1-218ENST00000635120 MAP7D2Q96T17 732 aa10.99□□□□□ -0.65
CSMD1-218ENST00000635120 SYTL4Q96C24 671 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-218ENST00000635120 ERC2O15083 957 aa10.99□□□□□ -0.65
CSMD1-218ENST00000635120 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
CSMD1-218ENST00000635120 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 API5Q9BZZ5 524 aaKnown RBP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 DDX58O95786 925 aaKnown RBP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 PANK1Q8TE04 598 aa10.98□□□□□ -0.65
CSMD1-218ENST00000635120 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 CWC15Q9P013 229 aaKnown RBP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 R3HCC1Q9Y3T6 440 aaKnown RBP10.98□□□□□ -0.65
CSMD1-218ENST00000635120 RNF214Q8ND24 703 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-218ENST00000635120 DIAPH1O60610 1272 aaKnown RBP10.97□□□□□ -0.65
CSMD1-218ENST00000635120 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 FYB1O15117 783 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 H0YHG0 523 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 SMC2O95347 1197 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 OFD1O75665 1012 aa10.97□□□□□ -0.65
CSMD1-218ENST00000635120 NFKBIBQ15653 356 aa10.96□□□□□ -0.65
CSMD1-218ENST00000635120 CAVIN1Q6NZI2 390 aaKnown RBP10.96□□□□□ -0.65
CSMD1-218ENST00000635120 TRIM5Q9C035 493 aa10.96□□□□□ -0.65
CSMD1-218ENST00000635120 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.65
CSMD1-218ENST00000635120 DCTN1Q14203 1278 aa10.96□□□□□ -0.66
CSMD1-218ENST00000635120 CCDC27Q2M243 656 aa10.96□□□□□ -0.66
CSMD1-218ENST00000635120 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.66
CSMD1-218ENST00000635120 SDF4Q9BRK5 362 aa10.96□□□□□ -0.66
CSMD1-218ENST00000635120 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-218ENST00000635120 CDC45O75419 566 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 ZFYVE27Q5T4F4 411 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 TSPYL4Q9UJ04 414 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 KINO60870 393 aaKnown RBP10.95□□□□□ -0.66
CSMD1-218ENST00000635120 CCDC173Q0VFZ6 552 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 KDM4AO75164 1064 aa10.95□□□□□ -0.66
CSMD1-218ENST00000635120 HMOX1P09601 288 aa10.94□□□□□ -0.66
CSMD1-218ENST00000635120 KRI1Q8N9T8 703 aaKnown RBP10.94□□□□□ -0.66
CSMD1-218ENST00000635120 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
CSMD1-218ENST00000635120 CNTLNQ9NXG0 1405 aa10.94□□□□□ -0.66
CSMD1-218ENST00000635120 MYO6Q9UM54 1294 aa10.94□□□□□ -0.66
CSMD1-218ENST00000635120 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
CSMD1-218ENST00000635120 MRE11P49959 708 aa10.93□□□□□ -0.66
CSMD1-218ENST00000635120 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-218ENST00000635120 WASHC4Q2M389 1173 aa10.93□□□□□ -0.66
CSMD1-218ENST00000635120 NEUROD6Q96NK8 337 aa10.93□□□□□ -0.66
CSMD1-218ENST00000635120 RDXP35241 583 aaKnown RBP10.93□□□□□ -0.66
CSMD1-218ENST00000635120 TSPY26PQ9H489 355 aa10.93□□□□□ -0.66
CSMD1-218ENST00000635120 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
CSMD1-218ENST00000635120 PSME1Q06323 249 aa10.93□□□□□ -0.66
CSMD1-218ENST00000635120 MTMR7Q9Y216 660 aa10.92□□□□□ -0.66
CSMD1-218ENST00000635120 CNTROBQ8N137 903 aa10.92□□□□□ -0.66
CSMD1-218ENST00000635120 SKIDA1Q1XH10 827 aa10.92□□□□□ -0.66
CSMD1-218ENST00000635120 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
CSMD1-218ENST00000635120 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-218ENST00000635120 RBM33Q96EV2 1170 aaKnown RBP10.92□□□□□ -0.66
CSMD1-218ENST00000635120 PSMA5P28066 241 aa10.92□□□□□ -0.66
CSMD1-218ENST00000635120 AXDND1Q5T1B0 1012 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-218ENST00000635120 FSD1Q9BTV5 496 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 TSPYL1Q9H0U9 437 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 GNAI1P63096 354 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 SETD1BQ9UPS6 1966 aaKnown RBP10.91□□□□□ -0.66
CSMD1-218ENST00000635120 AIMP1Q12904 312 aaKnown RBP10.91□□□□□ -0.66
CSMD1-218ENST00000635120 SPC24Q8NBT2 197 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 FMNL2Q96PY5 1086 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 XBP1P17861 261 aa10.91□□□□□ -0.66
CSMD1-218ENST00000635120 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
CSMD1-218ENST00000635120 CCP110O43303 1012 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 FIBPO43427 364 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 CCDC7Q96M83 1385 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 TRAK2O60296 914 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 SUPT6HQ7KZ85 1726 aaKnown RBP10.9□□□□□ -0.66
CSMD1-218ENST00000635120 MBD3O95983 291 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
CSMD1-218ENST00000635120 CCDC66A2RUB6 948 aa10.9□□□□□ -0.67
CSMD1-218ENST00000635120 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.67
CSMD1-218ENST00000635120 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-218ENST00000635120 MAGEC2Q9UBF1 373 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-218ENST00000635120 PDCP20941 246 aa10.89□□□□□ -0.67
CSMD1-218ENST00000635120 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
CSMD1-218ENST00000635120 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
CSMD1-218ENST00000635120 ATP2B1P20020 1258 aa10.89□□□□□ -0.67
CSMD1-218ENST00000635120 CEBPZQ03701 1054 aaKnown RBP10.89□□□□□ -0.67
CSMD1-218ENST00000635120 LEKR1Q6ZMV7 388 aa10.89□□□□□ -0.67
CSMD1-218ENST00000635120 SMARCE1Q969G3 411 aa10.89□□□□□ -0.67
CSMD1-218ENST00000635120 AAMPQ13685 434 aa10.88□□□□□ -0.67
CSMD1-218ENST00000635120 CDK5RAP3Q96JB5 506 aa10.88□□□□□ -0.67
CSMD1-218ENST00000635120 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-218ENST00000635120 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
CSMD1-218ENST00000635120 PLCD4Q9BRC7 762 aa10.87□□□□□ -0.67
CSMD1-218ENST00000635120 TXLNAP40222 546 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms