RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TRIM32Q13049 653 aa6.95□□□□□ -1.3
SMARCB1-208ENST00000634926 RDH13Q8NBN7 331 aa6.95□□□□□ -1.3
SMARCB1-208ENST00000634926 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.95□□□□□ -1.3
SMARCB1-208ENST00000634926 DDX11L8A8MPP1 907 aa6.94□□□□□ -1.3
SMARCB1-208ENST00000634926 GCGRP47871 477 aa6.94□□□□□ -1.3
SMARCB1-208ENST00000634926 SKOR1P84550 965 aa6.94□□□□□ -1.3
SMARCB1-208ENST00000634926 SEMA3EO15041 775 aa6.93□□□□□ -1.3
SMARCB1-208ENST00000634926 VEGFBP49765 207 aa6.93□□□□□ -1.3
SMARCB1-208ENST00000634926 MSS51Q4VC12 460 aa6.93□□□□□ -1.3
SMARCB1-208ENST00000634926 DAXXQ9UER7 740 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-208ENST00000634926 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-208ENST00000634926 SENP2Q9HC62 589 aa6.92□□□□□ -1.3
SMARCB1-208ENST00000634926 TSHZ2Q9NRE2 1034 aa6.92□□□□□ -1.3
SMARCB1-208ENST00000634926 GPR37O15354 613 aa6.91□□□□□ -1.3
SMARCB1-208ENST00000634926 ZBTB24O43167 697 aaPredicted RBP6.91□□□□□ -1.3
SMARCB1-208ENST00000634926 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
SMARCB1-208ENST00000634926 BMP1P13497 986 aa6.9□□□□□ -1.3
SMARCB1-208ENST00000634926 MMP16P51512 607 aa6.9□□□□□ -1.3
SMARCB1-208ENST00000634926 RSPH4AQ5TD94 716 aa6.9□□□□□ -1.3
SMARCB1-208ENST00000634926 TRIM46Q7Z4K8 759 aa6.9□□□□□ -1.3
SMARCB1-208ENST00000634926 HIC1Q14526 733 aa6.89□□□□□ -1.31
SMARCB1-208ENST00000634926 RBM26Q5T8P6 1007 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-208ENST00000634926 RC3H1Q5TC82 1133 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-208ENST00000634926 ZSCAN1Q8NBB4 408 aa6.89□□□□□ -1.31
SMARCB1-208ENST00000634926 NXF1Q9UBU9 619 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-208ENST00000634926 HLA-CQ95604 372 aa6.88□□□□□ -1.31
SMARCB1-208ENST00000634926 DXOO77932 396 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-208ENST00000634926 KIFC2Q96AC6 838 aa6.87□□□□□ -1.31
SMARCB1-208ENST00000634926 SUZ12Q15022 739 aaKnown RBP6.86□□□□□ -1.31
SMARCB1-208ENST00000634926 H3BM21 787 aa6.85□□□□□ -1.31
SMARCB1-208ENST00000634926 GNPATO15228 680 aa6.85□□□□□ -1.31
SMARCB1-208ENST00000634926 SIAH2O43255 324 aa6.85□□□□□ -1.31
SMARCB1-208ENST00000634926 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
SMARCB1-208ENST00000634926 SLC16A10Q8TF71 515 aa6.84□□□□□ -1.31
SMARCB1-208ENST00000634926 GSK3AP49840 483 aa6.83□□□□□ -1.32
SMARCB1-208ENST00000634926 PTCRAQ6ISU1 281 aaPredicted RBP6.83□□□□□ -1.32
SMARCB1-208ENST00000634926 CCDC24Q8N4L8 307 aa6.83□□□□□ -1.32
SMARCB1-208ENST00000634926 IRF7Q92985 503 aa6.82□□□□□ -1.32
SMARCB1-208ENST00000634926 USB1Q9BQ65 265 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-208ENST00000634926 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-208ENST00000634926 FAM181BA6NEQ2 426 aa6.8□□□□□ -1.32
SMARCB1-208ENST00000634926 WNT7BP56706 349 aa6.8□□□□□ -1.32
SMARCB1-208ENST00000634926 SYMPKQ92797 1274 aaKnown RBP6.8□□□□□ -1.32
SMARCB1-208ENST00000634926 TESPA1A2RU30 521 aaPredicted RBP6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 CAPN5O15484 640 aaPredicted RBP6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 CD46P15529 392 aa6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 GUCA2AQ02747 115 aa6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 SULF1Q8IWU6 871 aa6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 NPAS3Q8IXF0 933 aa6.79□□□□□ -1.32
SMARCB1-208ENST00000634926 Q3C1V9 767 aa6.78□□□□□ -1.32
SMARCB1-208ENST00000634926 ZFP42Q96MM3 310 aa6.78□□□□□ -1.32
SMARCB1-208ENST00000634926 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
SMARCB1-208ENST00000634926 KDM4AO75164 1064 aa6.75□□□□□ -1.33
SMARCB1-208ENST00000634926 SH3BP2P78314 561 aa6.75□□□□□ -1.33
SMARCB1-208ENST00000634926 GRIPAP1Q4V328 841 aa6.75□□□□□ -1.33
SMARCB1-208ENST00000634926 JUNDP17535 347 aa6.73□□□□□ -1.33
SMARCB1-208ENST00000634926 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
SMARCB1-208ENST00000634926 TLL2Q9Y6L7 1015 aa6.73□□□□□ -1.33
SMARCB1-208ENST00000634926 HOXA2O43364 376 aa6.72□□□□□ -1.33
SMARCB1-208ENST00000634926 VSIG8P0DPA2 414 aa6.72□□□□□ -1.33
SMARCB1-208ENST00000634926 WASF2Q9Y6W5 498 aa6.72□□□□□ -1.33
SMARCB1-208ENST00000634926 KCNMA1Q12791 1236 aa6.71□□□□□ -1.34
SMARCB1-208ENST00000634926 PURBQ96QR8 312 aaKnown RBP6.71□□□□□ -1.34
SMARCB1-208ENST00000634926 NUDT12Q9BQG2 462 aa6.7□□□□□ -1.34
SMARCB1-208ENST00000634926 KLF16Q9BXK1 252 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-208ENST00000634926 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-208ENST00000634926 TIMP2P16035 220 aa6.69□□□□□ -1.34
SMARCB1-208ENST00000634926 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
SMARCB1-208ENST00000634926 MRPL14Q6P1L8 145 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-208ENST00000634926 PCDHGC3Q9UN70 934 aa6.69□□□□□ -1.34
SMARCB1-208ENST00000634926 MDM2Q00987 491 aaPredicted RBP6.68□□□□□ -1.34
SMARCB1-208ENST00000634926 KRT76Q01546 638 aa6.67□□□□□ -1.34
SMARCB1-208ENST00000634926 NNTQ13423 1086 aa6.67□□□□□ -1.34
SMARCB1-208ENST00000634926 P3H3Q8IVL6 736 aa6.67□□□□□ -1.34
SMARCB1-208ENST00000634926 BAP1Q92560 729 aa6.67□□□□□ -1.34
SMARCB1-208ENST00000634926 USP46P62068 366 aa6.66□□□□□ -1.34
SMARCB1-208ENST00000634926 RETREG3Q86VR2 466 aa6.65□□□□□ -1.34
SMARCB1-208ENST00000634926 GPR161Q8N6U8 529 aaKnown RBP6.65□□□□□ -1.34
SMARCB1-208ENST00000634926 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.34
SMARCB1-208ENST00000634926 PPFIA3O75145 1194 aa6.64□□□□□ -1.35
SMARCB1-208ENST00000634926 WDR4P57081 412 aaKnown RBP6.64□□□□□ -1.35
SMARCB1-208ENST00000634926 RASSF7Q02833 373 aa6.64□□□□□ -1.35
SMARCB1-208ENST00000634926 ZFAND3Q9H8U3 227 aa6.64□□□□□ -1.35
SMARCB1-208ENST00000634926 CCNYL3P0C7X3 344 aa6.63□□□□□ -1.35
SMARCB1-208ENST00000634926 GPIHBP1Q8IV16 184 aa6.63□□□□□ -1.35
SMARCB1-208ENST00000634926 SMYD5Q6GMV2 418 aa6.62□□□□□ -1.35
SMARCB1-208ENST00000634926 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
SMARCB1-208ENST00000634926 EVA1BQ9NVM1 165 aa6.62□□□□□ -1.35
SMARCB1-208ENST00000634926 IRF6O14896 467 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 GDF11O95390 407 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 ADH1CP00326 375 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 NR3C2P08235 984 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 MS4A1P11836 297 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 MAP2K5Q13163 448 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 SCARF1Q14162 830 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 C6orf118Q5T5N4 469 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 TMEM151AQ8N4L1 468 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 ADAMTS8Q9UP79 889 aa6.61□□□□□ -1.35
SMARCB1-208ENST00000634926 MPNDQ8N594 471 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms