RNA–Protein interactions for RNA: ENST00000634343.1

SMARCA2-221, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-221ENST00000634343 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
SMARCA2-221ENST00000634343 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-221ENST00000634343 ABCC9O60706 1549 aa11.68□□□□□ -0.54
SMARCA2-221ENST00000634343 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
SMARCA2-221ENST00000634343 TTC24A2A3L6 582 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-221ENST00000634343 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-221ENST00000634343 FECHP22830 423 aa11.65□□□□□ -0.54
SMARCA2-221ENST00000634343 ZC3H15Q8WU90 426 aaKnown RBP11.65□□□□□ -0.54
SMARCA2-221ENST00000634343 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-221ENST00000634343 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
SMARCA2-221ENST00000634343 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
SMARCA2-221ENST00000634343 LCE2AQ5TA79 106 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-221ENST00000634343 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
SMARCA2-221ENST00000634343 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
SMARCA2-221ENST00000634343 Q3C1V9 767 aa11.61□□□□□ -0.55
SMARCA2-221ENST00000634343 WFS1O76024 890 aa11.6□□□□□ -0.55
SMARCA2-221ENST00000634343 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
SMARCA2-221ENST00000634343 WNT7AO00755 349 aa11.59□□□□□ -0.55
SMARCA2-221ENST00000634343 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-221ENST00000634343 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
SMARCA2-221ENST00000634343 GPR37O15354 613 aa11.58□□□□□ -0.56
SMARCA2-221ENST00000634343 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
SMARCA2-221ENST00000634343 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
SMARCA2-221ENST00000634343 TRIM32Q13049 653 aa11.55□□□□□ -0.56
SMARCA2-221ENST00000634343 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
SMARCA2-221ENST00000634343 MMP16P51512 607 aa11.54□□□□□ -0.56
SMARCA2-221ENST00000634343 SMPD1P17405 629 aa11.53□□□□□ -0.56
SMARCA2-221ENST00000634343 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-221ENST00000634343 ZMYND10O75800 440 aa11.52□□□□□ -0.57
SMARCA2-221ENST00000634343 GPIHBP1Q8IV16 184 aa11.52□□□□□ -0.57
SMARCA2-221ENST00000634343 SENP2Q9HC62 589 aa11.52□□□□□ -0.57
SMARCA2-221ENST00000634343 INSM1Q01101 510 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-221ENST00000634343 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-221ENST00000634343 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
SMARCA2-221ENST00000634343 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
SMARCA2-221ENST00000634343 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
SMARCA2-221ENST00000634343 STK17AQ9UEE5 414 aa11.5□□□□□ -0.57
SMARCA2-221ENST00000634343 NFX1Q12986 1120 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-221ENST00000634343 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
SMARCA2-221ENST00000634343 WIPF1O43516 503 aa11.48□□□□□ -0.57
SMARCA2-221ENST00000634343 KDM4AO75164 1064 aa11.48□□□□□ -0.57
SMARCA2-221ENST00000634343 CD46P15529 392 aa11.48□□□□□ -0.57
SMARCA2-221ENST00000634343 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
SMARCA2-221ENST00000634343 USP46P62068 366 aa11.47□□□□□ -0.57
SMARCA2-221ENST00000634343 J3QL48 77 aa11.46□□□□□ -0.57
SMARCA2-221ENST00000634343 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
SMARCA2-221ENST00000634343 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
SMARCA2-221ENST00000634343 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
SMARCA2-221ENST00000634343 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
SMARCA2-221ENST00000634343 WNT7BP56706 349 aa11.44□□□□□ -0.58
SMARCA2-221ENST00000634343 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-221ENST00000634343 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-221ENST00000634343 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-221ENST00000634343 HPS1Q92902 700 aa11.42□□□□□ -0.58
SMARCA2-221ENST00000634343 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
SMARCA2-221ENST00000634343 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
SMARCA2-221ENST00000634343 IRF6O14896 467 aa11.37□□□□□ -0.59
SMARCA2-221ENST00000634343 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
SMARCA2-221ENST00000634343 AK7Q96M32 723 aa11.37□□□□□ -0.59
SMARCA2-221ENST00000634343 HOXA2O43364 376 aa11.36□□□□□ -0.59
SMARCA2-221ENST00000634343 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
SMARCA2-221ENST00000634343 JUNDP17535 347 aa11.36□□□□□ -0.59
SMARCA2-221ENST00000634343 SKOR1P84550 965 aa11.36□□□□□ -0.59
SMARCA2-221ENST00000634343 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-221ENST00000634343 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
SMARCA2-221ENST00000634343 HLA-CQ95604 372 aa11.33□□□□□ -0.6
SMARCA2-221ENST00000634343 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
SMARCA2-221ENST00000634343 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
SMARCA2-221ENST00000634343 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-221ENST00000634343 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
SMARCA2-221ENST00000634343 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
SMARCA2-221ENST00000634343 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
SMARCA2-221ENST00000634343 CLCN1P35523 988 aa11.3□□□□□ -0.6
SMARCA2-221ENST00000634343 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
SMARCA2-221ENST00000634343 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
SMARCA2-221ENST00000634343 NXF1Q9UBU9 619 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-221ENST00000634343 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-221ENST00000634343 ARXQ96QS3 562 aa11.28□□□□□ -0.6
SMARCA2-221ENST00000634343 CAPN5O15484 640 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-221ENST00000634343 SIAH2O43255 324 aa11.27□□□□□ -0.61
SMARCA2-221ENST00000634343 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
SMARCA2-221ENST00000634343 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
SMARCA2-221ENST00000634343 NPAS3Q8IXF0 933 aa11.27□□□□□ -0.61
SMARCA2-221ENST00000634343 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-221ENST00000634343 CCDC180Q9P1Z9 1646 aa11.25□□□□□ -0.61
SMARCA2-221ENST00000634343 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-221ENST00000634343 IRF7Q92985 503 aa11.25□□□□□ -0.61
SMARCA2-221ENST00000634343 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
SMARCA2-221ENST00000634343 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
SMARCA2-221ENST00000634343 TRIM66O15016 1216 aa11.23□□□□□ -0.61
SMARCA2-221ENST00000634343 FDX1P10109 184 aa11.23□□□□□ -0.61
SMARCA2-221ENST00000634343 MS4A1P11836 297 aa11.23□□□□□ -0.61
SMARCA2-221ENST00000634343 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-221ENST00000634343 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
SMARCA2-221ENST00000634343 BMP1P13497 986 aa11.21□□□□□ -0.61
SMARCA2-221ENST00000634343 PDE4DQ08499 809 aa11.21□□□□□ -0.61
SMARCA2-221ENST00000634343 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
SMARCA2-221ENST00000634343 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
SMARCA2-221ENST00000634343 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
SMARCA2-221ENST00000634343 SH3BP2P78314 561 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms