RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FUT2Q10981 343 aa7.97□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 ATP6V1AP38606 617 aa7.96□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 SUZ12Q15022 739 aaKnown RBP7.96□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 TRIM32Q13049 653 aa7.95□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 SALL2Q9Y467 1007 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 FCHSD2O94868 740 aa7.94□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 RDH13Q8NBN7 331 aa7.94□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 IRF7Q92985 503 aa7.94□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 FECHP22830 423 aa7.93□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 ARHGEF1Q92888 912 aaKnown RBP7.92□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 NPAS3Q8IXF0 933 aa7.91□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 TSHZ2Q9NRE2 1034 aa7.91□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 VEGFBP49765 207 aa7.9□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 RNF19BQ6ZMZ0 732 aa7.9□□□□□ -1.14
NPHP3-ACAD11-202ENST00000632629 DDX11L8A8MPP1 907 aa7.89□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 GCGRP47871 477 aa7.88□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 ERBB4Q15303 1308 aa7.87□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 H3BM21 787 aa7.87□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 MMP16P51512 607 aa7.87□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 RC3H1Q5TC82 1133 aaKnown RBP7.87□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 ALDH1A1P00352 501 aa7.85□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 BMP1P13497 986 aa7.85□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 SKOR1P84550 965 aa7.85□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 TRIM46Q7Z4K8 759 aa7.85□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 HIC1Q14526 733 aa7.84□□□□□ -1.15
NPHP3-ACAD11-202ENST00000632629 WNT7BP56706 349 aa7.83□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 SULF1Q8IWU6 871 aa7.83□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 KCNV2Q8TDN2 545 aa7.83□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 NLRP7Q8WX94 980 aa7.83□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 Q3C1V9 767 aa7.82□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 DXOO77932 396 aaKnown RBP7.81□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 CCDC24Q8N4L8 307 aa7.81□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 KCNMA1Q12791 1236 aa7.79□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 VSIG10Q8N0Z9 540 aa7.79□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 SIAH2O43255 324 aa7.78□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 ZFP42Q96MM3 310 aa7.78□□□□□ -1.16
NPHP3-ACAD11-202ENST00000632629 GSK3AP49840 483 aa7.77□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 WASF2Q9Y6W5 498 aa7.77□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 GNPATO15228 680 aa7.76□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 PHOX2BQ99453 314 aa7.76□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 SEMA3EO15041 775 aa7.75□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 VSIG8P0DPA2 414 aa7.74□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 SMYD5Q6GMV2 418 aa7.74□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 TMEM151AQ8N4L1 468 aa7.72□□□□□ -1.17
NPHP3-ACAD11-202ENST00000632629 RBM26Q5T8P6 1007 aaKnown RBP7.71□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 GPR37O15354 613 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 KDM4AO75164 1064 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 GDF11O95390 407 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 RASSF7Q02833 373 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 HLA-CQ95604 372 aa7.69□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 CD46P15529 392 aa7.68□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 JUNDP17535 347 aa7.68□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 MRPL14Q6P1L8 145 aaKnown RBP7.68□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 PURBQ96QR8 312 aaKnown RBP7.68□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 SCARF1Q14162 830 aa7.67□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 SH3BP2P78314 561 aa7.66□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 NUDT12Q9BQG2 462 aa7.66□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
NPHP3-ACAD11-202ENST00000632629 TULP1O00294 542 aaPredicted RBP7.64□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 USP46P62068 366 aa7.64□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 NNTQ13423 1086 aa7.63□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 TLL2Q9Y6L7 1015 aa7.63□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 RNF225M0QZC1 329 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 HOXA2O43364 376 aa7.62□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 TIMP2P16035 220 aa7.62□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 GUCA2AQ02747 115 aa7.62□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 ADAMTS8Q9UP79 889 aa7.62□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 PLEKHG3A1L390 1219 aa7.61□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 MAN1A2O60476 641 aa7.6□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 ADH1CP00326 375 aa7.59□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 RETREG3Q86VR2 466 aa7.59□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 MPNDQ8N594 471 aa7.59□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 KLF16Q9BXK1 252 aaPredicted RBP7.59□□□□□ -1.19
NPHP3-ACAD11-202ENST00000632629 CCNYL3P0C7X3 344 aa7.58□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 KRT76Q01546 638 aa7.58□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 GPAT2Q6NUI2 795 aa7.58□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 BAP1Q92560 729 aa7.58□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 VARSP26640 1264 aaKnown RBP7.57□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 UNC93B1Q9H1C4 597 aa7.57□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 MS4A1P11836 297 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms