RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 ADGRB2O60241 1585 aa11.79□□□□□ -0.52
MECP2-220ENST00000631210 EIF4G2P78344 907 aaKnown RBP eCLIP11.79□□□□□ -0.52
MECP2-220ENST00000631210 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
MECP2-220ENST00000631210 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
MECP2-220ENST00000631210 NCOA3Q9Y6Q9 1424 aa11.78□□□□□ -0.52
MECP2-220ENST00000631210 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
MECP2-220ENST00000631210 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
MECP2-220ENST00000631210 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
MECP2-220ENST00000631210 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
MECP2-220ENST00000631210 POGKQ9P215 609 aa11.76□□□□□ -0.53
MECP2-220ENST00000631210 DISP3Q9P2K9 1392 aa11.76□□□□□ -0.53
MECP2-220ENST00000631210 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
MECP2-220ENST00000631210 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
MECP2-220ENST00000631210 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
MECP2-220ENST00000631210 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
MECP2-220ENST00000631210 PRR36Q9H6K5 1346 aa11.74□□□□□ -0.53
MECP2-220ENST00000631210 WASLO00401 505 aaPredicted RBP11.73□□□□□ -0.53
MECP2-220ENST00000631210 DCCP43146 1447 aa11.73□□□□□ -0.53
MECP2-220ENST00000631210 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
MECP2-220ENST00000631210 C19orf44Q9H6X5 657 aa11.72□□□□□ -0.53
MECP2-220ENST00000631210 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
MECP2-220ENST00000631210 ATP7BP35670 1465 aa11.71□□□□□ -0.53
MECP2-220ENST00000631210 MST1RQ04912 1400 aa11.71□□□□□ -0.53
MECP2-220ENST00000631210 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
MECP2-220ENST00000631210 TOPAZ1Q8N9V7 1692 aa11.7□□□□□ -0.54
MECP2-220ENST00000631210 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
MECP2-220ENST00000631210 MYOM1P52179 1685 aa11.69□□□□□ -0.54
MECP2-220ENST00000631210 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
MECP2-220ENST00000631210 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
MECP2-220ENST00000631210 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
MECP2-220ENST00000631210 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
MECP2-220ENST00000631210 MSH6P52701 1360 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 CCDC7Q96M83 1385 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 TMF1P82094 1093 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 ANKARQ7Z5J8 1434 aa11.68□□□□□ -0.54
MECP2-220ENST00000631210 NUDT16Q96DE0 195 aaKnown RBP11.67□□□□□ -0.54
MECP2-220ENST00000631210 CD163L1Q9NR16 1453 aa11.67□□□□□ -0.54
MECP2-220ENST00000631210 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
MECP2-220ENST00000631210 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
MECP2-220ENST00000631210 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
MECP2-220ENST00000631210 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
MECP2-220ENST00000631210 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
MECP2-220ENST00000631210 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
MECP2-220ENST00000631210 ATF3P18847 181 aa11.64□□□□□ -0.55
MECP2-220ENST00000631210 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
MECP2-220ENST00000631210 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
MECP2-220ENST00000631210 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 SLAIN2Q9P270 581 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 ITSN1Q15811 1721 aa11.63□□□□□ -0.55
MECP2-220ENST00000631210 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
MECP2-220ENST00000631210 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
MECP2-220ENST00000631210 BRINP3Q76B58 766 aa11.62□□□□□ -0.55
MECP2-220ENST00000631210 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
MECP2-220ENST00000631210 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
MECP2-220ENST00000631210 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
MECP2-220ENST00000631210 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 ROBO1Q9Y6N7 1651 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 MON2Q7Z3U7 1717 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 ACEP12821 1306 aa11.6□□□□□ -0.55
MECP2-220ENST00000631210 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
MECP2-220ENST00000631210 A0A1W2PP64 1363 aa11.59□□□□□ -0.55
MECP2-220ENST00000631210 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
MECP2-220ENST00000631210 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
MECP2-220ENST00000631210 DDX17Q92841 729 aaKnown RBP11.59□□□□□ -0.55
MECP2-220ENST00000631210 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
MECP2-220ENST00000631210 PXDNQ92626 1479 aa11.58□□□□□ -0.56
MECP2-220ENST00000631210 TRPM3Q9HCF6 1732 aaPredicted RBP11.58□□□□□ -0.56
MECP2-220ENST00000631210 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.56
MECP2-220ENST00000631210 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
MECP2-220ENST00000631210 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
MECP2-220ENST00000631210 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
MECP2-220ENST00000631210 TOM1O60784 492 aa11.57□□□□□ -0.56
MECP2-220ENST00000631210 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
MECP2-220ENST00000631210 USP6P35125 1406 aa11.57□□□□□ -0.56
MECP2-220ENST00000631210 FOXO3O43524 673 aa11.56□□□□□ -0.56
MECP2-220ENST00000631210 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
MECP2-220ENST00000631210 PANK3Q9H999 370 aa11.56□□□□□ -0.56
MECP2-220ENST00000631210 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
MECP2-220ENST00000631210 COL16A1Q07092 1604 aaPredicted RBP11.54□□□□□ -0.56
MECP2-220ENST00000631210 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
MECP2-220ENST00000631210 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
MECP2-220ENST00000631210 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
MECP2-220ENST00000631210 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
MECP2-220ENST00000631210 EDC4Q6P2E9 1401 aaKnown RBP11.53□□□□□ -0.56
MECP2-220ENST00000631210 PIP4K2BP78356 416 aa11.53□□□□□ -0.56
MECP2-220ENST00000631210 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
MECP2-220ENST00000631210 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
MECP2-220ENST00000631210 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
MECP2-220ENST00000631210 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
MECP2-220ENST00000631210 PIK3C2AO00443 1686 aa11.52□□□□□ -0.56
MECP2-220ENST00000631210 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms