RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
TREX1-206ENST00000629913 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
TREX1-206ENST00000629913 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
TREX1-206ENST00000629913 ORAI2Q96SN7 254 aa20.09■□□□□ 0.81
TREX1-206ENST00000629913 POTEAQ6S8J7 498 aa20.08■□□□□ 0.81
TREX1-206ENST00000629913 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
TREX1-206ENST00000629913 SIRT1Q96EB6 747 aa20.07■□□□□ 0.8
TREX1-206ENST00000629913 DHX57Q6P158 1386 aaKnown RBP20.07■□□□□ 0.8
TREX1-206ENST00000629913 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
TREX1-206ENST00000629913 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
TREX1-206ENST00000629913 SOS2Q07890 1332 aaPredicted RBP20.05■□□□□ 0.8
TREX1-206ENST00000629913 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
TREX1-206ENST00000629913 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
TREX1-206ENST00000629913 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
TREX1-206ENST00000629913 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
TREX1-206ENST00000629913 NUTM2BA6NNL0 878 aaPredicted RBP20.02■□□□□ 0.8
TREX1-206ENST00000629913 NUTM2EB1AL46 878 aaPredicted RBP20.02■□□□□ 0.8
TREX1-206ENST00000629913 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.8
TREX1-206ENST00000629913 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
TREX1-206ENST00000629913 ESCO1Q5FWF5 840 aa20.01■□□□□ 0.79
TREX1-206ENST00000629913 PXDNQ92626 1479 aa20■□□□□ 0.79
TREX1-206ENST00000629913 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
TREX1-206ENST00000629913 NPHP3Q7Z494 1330 aa20■□□□□ 0.79
TREX1-206ENST00000629913 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
TREX1-206ENST00000629913 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
TREX1-206ENST00000629913 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
TREX1-206ENST00000629913 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
TREX1-206ENST00000629913 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
TREX1-206ENST00000629913 ADGRB2O60241 1585 aa19.97■□□□□ 0.79
TREX1-206ENST00000629913 FOXO3O43524 673 aa19.95■□□□□ 0.78
TREX1-206ENST00000629913 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
TREX1-206ENST00000629913 POGKQ9P215 609 aa19.94■□□□□ 0.78
TREX1-206ENST00000629913 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
TREX1-206ENST00000629913 AFF2P51816 1311 aa19.93■□□□□ 0.78
TREX1-206ENST00000629913 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
TREX1-206ENST00000629913 RGPD8O14715 1765 aaPredicted RBP19.91■□□□□ 0.78
TREX1-206ENST00000629913 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
TREX1-206ENST00000629913 ANKARQ7Z5J8 1434 aa19.91■□□□□ 0.78
TREX1-206ENST00000629913 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
TREX1-206ENST00000629913 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
TREX1-206ENST00000629913 KIAA1210Q9ULL0 1709 aa19.9■□□□□ 0.78
TREX1-206ENST00000629913 ADAMTS2O95450 1211 aa19.89■□□□□ 0.77
TREX1-206ENST00000629913 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
TREX1-206ENST00000629913 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
TREX1-206ENST00000629913 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
TREX1-206ENST00000629913 SPATA31A3Q5VYP0 1347 aa19.86■□□□□ 0.77
TREX1-206ENST00000629913 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
TREX1-206ENST00000629913 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
TREX1-206ENST00000629913 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
TREX1-206ENST00000629913 RXRBP28702 533 aa19.85■□□□□ 0.77
TREX1-206ENST00000629913 KRT28Q7Z3Y7 464 aa19.85■□□□□ 0.77
TREX1-206ENST00000629913 NGLY1Q96IV0 654 aa19.85■□□□□ 0.77
TREX1-206ENST00000629913 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
TREX1-206ENST00000629913 WASLO00401 505 aaPredicted RBP19.83■□□□□ 0.77
TREX1-206ENST00000629913 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
TREX1-206ENST00000629913 PRR36Q9H6K5 1346 aa19.82■□□□□ 0.76
TREX1-206ENST00000629913 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
TREX1-206ENST00000629913 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
TREX1-206ENST00000629913 PSME1Q06323 249 aa19.8■□□□□ 0.76
TREX1-206ENST00000629913 NBPF1Q3BBV0 1214 aa19.8■□□□□ 0.76
TREX1-206ENST00000629913 PMFBP1Q8TBY8 1022 aa19.8■□□□□ 0.76
TREX1-206ENST00000629913 QTRT2Q9H974 415 aaKnown RBP19.8■□□□□ 0.76
TREX1-206ENST00000629913 RBM6P78332 1123 aaKnown RBP19.79■□□□□ 0.76
TREX1-206ENST00000629913 USP21Q9UK80 565 aa19.79■□□□□ 0.76
TREX1-206ENST00000629913 ATP7BP35670 1465 aa19.79■□□□□ 0.76
TREX1-206ENST00000629913 RGS12O14924 1447 aa19.78■□□□□ 0.76
TREX1-206ENST00000629913 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
TREX1-206ENST00000629913 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
TREX1-206ENST00000629913 TRPM3Q9HCF6 1732 aaPredicted RBP19.78■□□□□ 0.76
TREX1-206ENST00000629913 ARHGEF10O15013 1369 aa19.77■□□□□ 0.76
TREX1-206ENST00000629913 BCL9LQ86UU0 1499 aa19.77■□□□□ 0.76
TREX1-206ENST00000629913 ATRNO75882 1429 aa19.76■□□□□ 0.75
TREX1-206ENST00000629913 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
TREX1-206ENST00000629913 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
TREX1-206ENST00000629913 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
TREX1-206ENST00000629913 GPRASP1Q5JY77 1395 aa19.74■□□□□ 0.75
TREX1-206ENST00000629913 ALS2Q96Q42 1657 aa19.74■□□□□ 0.75
TREX1-206ENST00000629913 TRPM1Q7Z4N2 1603 aa19.73■□□□□ 0.75
TREX1-206ENST00000629913 SLIT2O94813 1529 aa19.73■□□□□ 0.75
TREX1-206ENST00000629913 TOPAZ1Q8N9V7 1692 aa19.73■□□□□ 0.75
TREX1-206ENST00000629913 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.73■□□□□ 0.75
TREX1-206ENST00000629913 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
TREX1-206ENST00000629913 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
TREX1-206ENST00000629913 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
TREX1-206ENST00000629913 CDK19Q9BWU1 502 aa19.72■□□□□ 0.75
TREX1-206ENST00000629913 LMOD2Q6P5Q4 547 aa19.71■□□□□ 0.75
TREX1-206ENST00000629913 NGDNQ8NEJ9 315 aaKnown RBP19.7■□□□□ 0.74
TREX1-206ENST00000629913 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
TREX1-206ENST00000629913 QRICH2Q9H0J4 1663 aa19.69■□□□□ 0.74
TREX1-206ENST00000629913 HAP1P54257 671 aaPredicted RBP19.69■□□□□ 0.74
TREX1-206ENST00000629913 UPF1Q92900 1129 aaKnown RBP eCLIP19.69■□□□□ 0.74
TREX1-206ENST00000629913 POLR3AO14802 1390 aaPredicted RBP19.68■□□□□ 0.74
TREX1-206ENST00000629913 PLEKHG5O94827 1062 aa19.67■□□□□ 0.74
TREX1-206ENST00000629913 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
TREX1-206ENST00000629913 PLCH1Q4KWH8 1693 aa19.67■□□□□ 0.74
TREX1-206ENST00000629913 CRYBG1Q9Y4K1 1723 aa19.67■□□□□ 0.74
TREX1-206ENST00000629913 NWD2Q9ULI1 1742 aa19.66■□□□□ 0.74
TREX1-206ENST00000629913 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
TREX1-206ENST00000629913 CCDC61Q9Y6R9 512 aa19.66■□□□□ 0.74
TREX1-206ENST00000629913 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms