RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
TCF4-268ENST00000629387 IPO9Q96P70 1041 aaKnown RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 KCNA1Q09470 495 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 ZNF771Q7L3S4 317 aaPredicted RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 KDM4CQ9H3R0 1056 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 ERCC6L2Q5T890 1561 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 CCDC172P0C7W6 258 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 ZNF853P0CG23 659 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 ERCC3P19447 782 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 GTF2A1P52655 376 aaPredicted RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 IRX5P78411 483 aaPredicted RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 NEXNQ0ZGT2 675 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 CSPP1Q1MSJ5 1256 aa7.38□□□□□ -1.23
TCF4-268ENST00000629387 HIRIP3Q9BW71 556 aaPredicted RBP7.38□□□□□ -1.23
TCF4-268ENST00000629387 SOCS7O14512 581 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 LMNB1P20700 586 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 TERF1P54274 439 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 MLECQ14165 292 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 SDR16C5Q8N3Y7 309 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 WWC3Q9ULE0 1092 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 CCDC184Q52MB2 194 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 ANAPC4Q9UJX5 808 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 NUB1Q9Y5A7 615 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 HMGB1P1B2RPK0 211 aaPredicted RBP7.37□□□□□ -1.23
TCF4-268ENST00000629387 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 HDGFL1Q5TGJ6 251 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
TCF4-268ENST00000629387 ZRANB2O95218 330 aaKnown RBP eCLIP7.36□□□□□ -1.23
TCF4-268ENST00000629387 TPM3P06753 285 aa7.36□□□□□ -1.23
TCF4-268ENST00000629387 CLCN1P35523 988 aa7.36□□□□□ -1.23
TCF4-268ENST00000629387 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
TCF4-268ENST00000629387 ANKRD23Q86SG2 305 aa7.36□□□□□ -1.23
TCF4-268ENST00000629387 TTC30BQ8N4P2 665 aa7.36□□□□□ -1.23
TCF4-268ENST00000629387 MS4A1P11836 297 aa7.35□□□□□ -1.23
TCF4-268ENST00000629387 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
TCF4-268ENST00000629387 LRCH2Q5VUJ6 765 aa7.35□□□□□ -1.23
TCF4-268ENST00000629387 WRNQ14191 1432 aaPredicted RBP eCLIP7.35□□□□□ -1.23
TCF4-268ENST00000629387 SMC4Q9NTJ3 1288 aa7.35□□□□□ -1.23
TCF4-268ENST00000629387 RPGRIP1LQ68CZ1 1315 aa7.35□□□□□ -1.23
TCF4-268ENST00000629387 UNCXA6NJT0 531 aa7.35□□□□□ -1.23
TCF4-268ENST00000629387 U2AF1L5P0DN76 240 aaPredicted RBP7.35□□□□□ -1.23
TCF4-268ENST00000629387 U2AF1Q01081 240 aaKnown RBP eCLIP7.35□□□□□ -1.23
TCF4-268ENST00000629387 MKRN4PQ13434 485 aaPredicted RBP7.35□□□□□ -1.23
TCF4-268ENST00000629387 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
TCF4-268ENST00000629387 CCT2P78371 535 aaKnown RBP7.34□□□□□ -1.23
TCF4-268ENST00000629387 TSPYL1Q9H0U9 437 aa7.34□□□□□ -1.23
TCF4-268ENST00000629387 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.23
TCF4-268ENST00000629387 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
TCF4-268ENST00000629387 RIMBP3CA6NJZ7 1639 aa7.34□□□□□ -1.23
TCF4-268ENST00000629387 RIMBP3BA6NNM3 1639 aa7.34□□□□□ -1.23
TCF4-268ENST00000629387 RIMBP3Q9UFD9 1639 aa7.34□□□□□ -1.23
TCF4-268ENST00000629387 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.24
TCF4-268ENST00000629387 SMAPO00193 183 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 HSP90AB2PQ58FF8 381 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 H0YHG0 523 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 IPO7O95373 1038 aaKnown RBP7.33□□□□□ -1.24
TCF4-268ENST00000629387 SARNPP82979 210 aaKnown RBP7.33□□□□□ -1.24
TCF4-268ENST00000629387 POTEDQ86YR6 584 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 ITFG2Q969R8 447 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 NBPF3Q9H094 633 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
TCF4-268ENST00000629387 SLC20A2Q08357 652 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 PUS10Q3MIT2 529 aaKnown RBP7.32□□□□□ -1.24
TCF4-268ENST00000629387 THOC2Q8NI27 1593 aaKnown RBP7.32□□□□□ -1.24
TCF4-268ENST00000629387 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 MECOMQ03112 1051 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 FAM161AQ3B820 660 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 PDILTQ8N807 584 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 CFAP53Q96M91 514 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 RMI1Q9H9A7 625 aa7.32□□□□□ -1.24
TCF4-268ENST00000629387 FEZ2Q9UHY8 353 aaPredicted RBP7.32□□□□□ -1.24
TCF4-268ENST00000629387 KIAA1211Q6ZU35 1233 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 RNF25Q96BH1 459 aaPredicted RBP7.31□□□□□ -1.24
TCF4-268ENST00000629387 LMTK3Q96Q04 1460 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 STK11IPQ8N1F8 1099 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 GOPCQ9HD26 462 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.31□□□□□ -1.24
TCF4-268ENST00000629387 PAX7P23759 505 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 C16orf87Q6PH81 154 aa7.31□□□□□ -1.24
TCF4-268ENST00000629387 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 GOLGA6L6A8MZA4 724 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 RBM5P52756 815 aaKnown RBP eCLIP7.3□□□□□ -1.24
TCF4-268ENST00000629387 PMM1Q92871 262 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 TRIM52Q96A61 297 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 NCAPGQ9BPX3 1015 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 IQSEC3Q9UPP2 1182 aaPredicted RBP7.3□□□□□ -1.24
TCF4-268ENST00000629387 E2F5Q15329 346 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 LRRC27Q9C0I9 530 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
TCF4-268ENST00000629387 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 GOLGA6L22H0YM25 854 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 LIG1P18858 919 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 SKAP1Q86WV1 359 aa7.3□□□□□ -1.24
TCF4-268ENST00000629387 NOL10Q9BSC4 688 aaKnown RBP7.3□□□□□ -1.24
TCF4-268ENST00000629387 WIZO95785 1651 aa7.29□□□□□ -1.24
TCF4-268ENST00000629387 FAM210AQ96ND0 272 aa7.29□□□□□ -1.24
TCF4-268ENST00000629387 CCP110O43303 1012 aa7.29□□□□□ -1.24
TCF4-268ENST00000629387 NAT1P18440 290 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms