RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 AFF2P51816 1311 aa13.32□□□□□ -0.28
SPTAN1-219ENST00000629378 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-219ENST00000629378 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
SPTAN1-219ENST00000629378 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
SPTAN1-219ENST00000629378 LAMC1P11047 1609 aa13.29□□□□□ -0.28
SPTAN1-219ENST00000629378 RXRBP28702 533 aa13.29□□□□□ -0.28
SPTAN1-219ENST00000629378 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
SPTAN1-219ENST00000629378 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
SPTAN1-219ENST00000629378 FOXO3O43524 673 aa13.28□□□□□ -0.28
SPTAN1-219ENST00000629378 HRCP23327 699 aa13.28□□□□□ -0.28
SPTAN1-219ENST00000629378 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-219ENST00000629378 RGPD8O14715 1765 aaPredicted RBP13.27□□□□□ -0.28
SPTAN1-219ENST00000629378 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 TECPR2O15040 1411 aa13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 CDC42BPGQ6DT37 1551 aa13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.29
SPTAN1-219ENST00000629378 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
SPTAN1-219ENST00000629378 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
SPTAN1-219ENST00000629378 FMN2Q9NZ56 1722 aa13.25□□□□□ -0.29
SPTAN1-219ENST00000629378 PXDNQ92626 1479 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 NPHP3Q7Z494 1330 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 MYOM2P54296 1465 aa13.23□□□□□ -0.29
SPTAN1-219ENST00000629378 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 USP21Q9UK80 565 aa13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
SPTAN1-219ENST00000629378 POGKQ9P215 609 aa13.2□□□□□ -0.3
SPTAN1-219ENST00000629378 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-219ENST00000629378 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
SPTAN1-219ENST00000629378 RGS12O14924 1447 aa13.19□□□□□ -0.3
SPTAN1-219ENST00000629378 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-219ENST00000629378 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-219ENST00000629378 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-219ENST00000629378 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
SPTAN1-219ENST00000629378 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
SPTAN1-219ENST00000629378 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
SPTAN1-219ENST00000629378 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
SPTAN1-219ENST00000629378 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
SPTAN1-219ENST00000629378 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
SPTAN1-219ENST00000629378 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
SPTAN1-219ENST00000629378 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
SPTAN1-219ENST00000629378 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-219ENST00000629378 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
SPTAN1-219ENST00000629378 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
SPTAN1-219ENST00000629378 PSME1Q06323 249 aa13.15□□□□□ -0.3
SPTAN1-219ENST00000629378 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
SPTAN1-219ENST00000629378 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
SPTAN1-219ENST00000629378 ATRNO75882 1429 aa13.13□□□□□ -0.31
SPTAN1-219ENST00000629378 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-219ENST00000629378 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-219ENST00000629378 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
SPTAN1-219ENST00000629378 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-219ENST00000629378 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
SPTAN1-219ENST00000629378 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
SPTAN1-219ENST00000629378 ADGRB2O60241 1585 aa13.1□□□□□ -0.31
SPTAN1-219ENST00000629378 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
SPTAN1-219ENST00000629378 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
SPTAN1-219ENST00000629378 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
SPTAN1-219ENST00000629378 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
SPTAN1-219ENST00000629378 SLIT2O94813 1529 aa13.08□□□□□ -0.31
SPTAN1-219ENST00000629378 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-219ENST00000629378 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
SPTAN1-219ENST00000629378 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
SPTAN1-219ENST00000629378 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
SPTAN1-219ENST00000629378 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.07□□□□□ -0.32
SPTAN1-219ENST00000629378 GLI3P10071 1580 aa13.07□□□□□ -0.32
SPTAN1-219ENST00000629378 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
SPTAN1-219ENST00000629378 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
SPTAN1-219ENST00000629378 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
SPTAN1-219ENST00000629378 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
SPTAN1-219ENST00000629378 GPRASP1Q5JY77 1395 aa13.05□□□□□ -0.32
SPTAN1-219ENST00000629378 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-219ENST00000629378 EP400Q96L91 3159 aa13.04□□□□□ -0.32
SPTAN1-219ENST00000629378 KIAA1210Q9ULL0 1709 aa13.03□□□□□ -0.32
SPTAN1-219ENST00000629378 VPS72Q15906 364 aa13.03□□□□□ -0.32
SPTAN1-219ENST00000629378 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms