RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SLAIN2Q9P270 581 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 STRCP1A6NGW2 1772 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2BA6NNL0 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2EB1AL46 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2AQ8IVF1 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 DEPDC5O75140 1603 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 MSH6P52701 1360 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 DAPK1P53355 1430 aa7.28□□□□□ -1.24
LINC00550-201ENST00000629293 RNF17Q9BXT8 1623 aaKnown RBP7.28□□□□□ -1.24
LINC00550-201ENST00000629293 FGD6Q6ZV73 1430 aa7.27□□□□□ -1.24
LINC00550-201ENST00000629293 PCDHB8Q9UN66 801 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 PCDHB13Q9Y5F0 798 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 MROH1Q8NDA8 1641 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 ERBINQ96RT1 1412 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 ATF3P18847 181 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 SLC52A1Q9NWF4 448 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 EFCAB6Q5THR3 1501 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARIH1Q9Y4X5 557 aaPredicted RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 CCDC61Q9Y6R9 512 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 PIK3C2BO00750 1634 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ZNF326Q5BKZ1 582 aaKnown RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 FAM135BQ49AJ0 1406 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARHGAP23Q9P227 1491 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 PTPN23Q9H3S7 1636 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARHGAP31Q2M1Z3 1444 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 ZC3H13Q5T200 1668 aaKnown RBP7.25□□□□□ -1.25
LINC00550-201ENST00000629293 MAST1Q9Y2H9 1570 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 PDAP1Q13442 181 aaKnown RBP7.25□□□□□ -1.25
LINC00550-201ENST00000629293 WDR70Q9NW82 654 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 CLEC11AQ9Y240 323 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 SLIT1O75093 1534 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 E2F4Q16254 413 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 ANKRD50Q9ULJ7 1429 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 PITPNM1O00562 1244 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 EIF2AK4Q9P2K8 1649 aaKnown RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 SYNMO15061 1565 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 PRDM15P57071 1507 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 RIMS2Q9UQ26 1411 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 MFSD10Q14728 455 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 ZNF467Q7Z7K2 595 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 JCADQ9P266 1359 aa7.23□□□□□ -1.25
LINC00550-201ENST00000629293 DDX17Q92841 729 aaKnown RBP7.23□□□□□ -1.25
LINC00550-201ENST00000629293 AMOTL2Q9Y2J4 779 aa7.23□□□□□ -1.25
LINC00550-201ENST00000629293 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC00550-201ENST00000629293 C19orf44Q9H6X5 657 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 ROBO1Q9Y6N7 1651 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 MS4A4AQ96JQ5 239 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 NUP155O75694 1391 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 MAP3K1Q13233 1512 aa7.21□□□□□ -1.25
LINC00550-201ENST00000629293 BARGINQ6ZT62 677 aa7.21□□□□□ -1.25
LINC00550-201ENST00000629293 NOS1P29475 1434 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 CAMK2BQ13554 666 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 ZNF579Q8NAF0 562 aaKnown RBP7.21□□□□□ -1.26
LINC00550-201ENST00000629293 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 TBX22Q9Y458 520 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 PSEN1P49768 467 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 PLEKHG1Q9ULL1 1385 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 RXRBP28702 533 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 ZNF772Q68DY9 489 aaPredicted RBP7.2□□□□□ -1.26
LINC00550-201ENST00000629293 CRISPLD2Q9H0B8 497 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 XIRP1Q702N8 1843 aaKnown RBP7.2□□□□□ -1.26
LINC00550-201ENST00000629293 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 ADGRB3O60242 1522 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 EFCAB3Q8N7B9 438 aa7.19□□□□□ -1.26
LINC00550-201ENST00000629293 NKTRP30414 1462 aaKnown RBP7.19□□□□□ -1.26
LINC00550-201ENST00000629293 PHF8Q9UPP1 1060 aa7.19□□□□□ -1.26
LINC00550-201ENST00000629293 AFF2P51816 1311 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 UPF1Q92900 1129 aaKnown RBP eCLIP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 NGLY1Q96IV0 654 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 CROCC2H7BZ55 1655 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 TET3O43151 1660 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 SETD1AO15047 1707 aaKnown RBP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 ZFYVE9O95405 1425 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 PHLPP1O60346 1717 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 SPATA31A6Q5VVP1 1343 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 LMTK2Q8IWU2 1503 aa7.17□□□□□ -1.26
LINC00550-201ENST00000629293 NUTM2FA1L443 756 aa7.17□□□□□ -1.26
LINC00550-201ENST00000629293 TSPYL2Q9H2G4 693 aaPredicted RBP7.17□□□□□ -1.26
LINC00550-201ENST00000629293 QTRT2Q9H974 415 aaKnown RBP7.17□□□□□ -1.26
LINC00550-201ENST00000629293 LRP6O75581 1613 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 CHADLQ6NUI6 762 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 ADAMTS13Q76LX8 1427 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 LRRC59Q96AG4 307 aaKnown RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 RBM42Q9BTD8 480 aaKnown RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 MYO5BQ9ULV0 1848 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
LINC00550-201ENST00000629293 RPRD2Q5VT52 1461 aaKnown RBP7.15□□□□□ -1.26
LINC00550-201ENST00000629293 ADGRL2O95490 1459 aa7.15□□□□□ -1.26
LINC00550-201ENST00000629293 GPR37O15354 613 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 C1orf115Q9H7X2 142 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 FARP1Q9Y4F1 1045 aaPredicted RBP7.15□□□□□ -1.27
LINC00550-201ENST00000629293 METP08581 1390 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 PTPRUQ92729 1446 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms