RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
SMN2-215ENST00000628696 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
SMN2-215ENST00000628696 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
SMN2-215ENST00000628696 WAPLQ7Z5K2 1190 aa28.28■■■□□ 2.12
SMN2-215ENST00000628696 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.12
SMN2-215ENST00000628696 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
SMN2-215ENST00000628696 TMEM132EQ6IEE7 984 aa28.26■■■□□ 2.11
SMN2-215ENST00000628696 RGS12O14924 1447 aa28.26■■■□□ 2.11
SMN2-215ENST00000628696 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SMN2-215ENST00000628696 NPHP3Q7Z494 1330 aa28.25■■■□□ 2.11
SMN2-215ENST00000628696 USP21Q9UK80 565 aa28.25■■■□□ 2.11
SMN2-215ENST00000628696 CDC42BPGQ6DT37 1551 aa28.24■■■□□ 2.11
SMN2-215ENST00000628696 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
SMN2-215ENST00000628696 XPCQ01831 940 aaPredicted RBP28.24■■■□□ 2.11
SMN2-215ENST00000628696 FOXO3O43524 673 aa28.23■■■□□ 2.11
SMN2-215ENST00000628696 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
SMN2-215ENST00000628696 TRPC5Q9UL62 973 aaPredicted RBP28.19■■■□□ 2.1
SMN2-215ENST00000628696 ABCC11Q96J66 1382 aa28.19■■■□□ 2.1
SMN2-215ENST00000628696 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
SMN2-215ENST00000628696 TECPR2O15040 1411 aa28.18■■■□□ 2.1
SMN2-215ENST00000628696 COL22A1Q8NFW1 1626 aaPredicted RBP28.18■■■□□ 2.1
SMN2-215ENST00000628696 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
SMN2-215ENST00000628696 PXDNQ92626 1479 aa28.16■■■□□ 2.1
SMN2-215ENST00000628696 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
SMN2-215ENST00000628696 KNDC1Q76NI1 1749 aa28.15■■■□□ 2.1
SMN2-215ENST00000628696 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
SMN2-215ENST00000628696 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SMN2-215ENST00000628696 ATRNO75882 1429 aa28.1■■■□□ 2.09
SMN2-215ENST00000628696 FMN2Q9NZ56 1722 aa28.1■■■□□ 2.09
SMN2-215ENST00000628696 MARF1Q9Y4F3 1742 aaKnown RBP28.1■■■□□ 2.09
SMN2-215ENST00000628696 C14orf93Q9H972 538 aaKnown RBP28.1■■■□□ 2.09
SMN2-215ENST00000628696 CFAP70Q5T0N1 1121 aa28.09■■■□□ 2.09
SMN2-215ENST00000628696 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
SMN2-215ENST00000628696 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
SMN2-215ENST00000628696 KRT28Q7Z3Y7 464 aa28.06■■■□□ 2.08
SMN2-215ENST00000628696 SIRT1Q96EB6 747 aa28.06■■■□□ 2.08
SMN2-215ENST00000628696 DHX57Q6P158 1386 aaKnown RBP28.06■■■□□ 2.08
SMN2-215ENST00000628696 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
SMN2-215ENST00000628696 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SMN2-215ENST00000628696 BCL9LQ86UU0 1499 aa28.05■■■□□ 2.08
SMN2-215ENST00000628696 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
SMN2-215ENST00000628696 SPATA31A3Q5VYP0 1347 aa28.04■■■□□ 2.08
SMN2-215ENST00000628696 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
SMN2-215ENST00000628696 PLEKHG5O94827 1062 aa28.01■■■□□ 2.07
SMN2-215ENST00000628696 PRAM1Q96QH2 718 aa28.01■■■□□ 2.07
SMN2-215ENST00000628696 HAP1P54257 671 aaPredicted RBP28■■■□□ 2.07
SMN2-215ENST00000628696 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
SMN2-215ENST00000628696 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
SMN2-215ENST00000628696 PSME1Q06323 249 aa27.99■■■□□ 2.07
SMN2-215ENST00000628696 POGKQ9P215 609 aa27.99■■■□□ 2.07
SMN2-215ENST00000628696 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
SMN2-215ENST00000628696 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
SMN2-215ENST00000628696 UNC5CLQ8IV45 518 aa27.97■■■□□ 2.07
SMN2-215ENST00000628696 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
SMN2-215ENST00000628696 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
SMN2-215ENST00000628696 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.93■■■□□ 2.06
SMN2-215ENST00000628696 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
SMN2-215ENST00000628696 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
SMN2-215ENST00000628696 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
SMN2-215ENST00000628696 SLIT2O94813 1529 aa27.92■■■□□ 2.06
SMN2-215ENST00000628696 TRAK1Q9UPV9 953 aa27.9■■■□□ 2.06
SMN2-215ENST00000628696 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
SMN2-215ENST00000628696 DLC1Q96QB1 1528 aa27.88■■■□□ 2.05
SMN2-215ENST00000628696 HIRIP3Q9BW71 556 aaPredicted RBP27.88■■■□□ 2.05
SMN2-215ENST00000628696 SBNO1A3KN83 1393 aa27.87■■■□□ 2.05
SMN2-215ENST00000628696 GLI3P10071 1580 aa27.87■■■□□ 2.05
SMN2-215ENST00000628696 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
SMN2-215ENST00000628696 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
SMN2-215ENST00000628696 CCDC9Q9Y3X0 531 aaKnown RBP27.86■■■□□ 2.05
SMN2-215ENST00000628696 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
SMN2-215ENST00000628696 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
SMN2-215ENST00000628696 ARHGEF10O15013 1369 aa27.85■■■□□ 2.05
SMN2-215ENST00000628696 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
SMN2-215ENST00000628696 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
SMN2-215ENST00000628696 VPS72Q15906 364 aa27.82■■■□□ 2.04
SMN2-215ENST00000628696 BRWD3Q6RI45 1802 aa27.82■■■□□ 2.04
SMN2-215ENST00000628696 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
SMN2-215ENST00000628696 EP400Q96L91 3159 aa27.81■■■□□ 2.04
SMN2-215ENST00000628696 SEPT12Q8IYM1 358 aa27.81■■■□□ 2.04
SMN2-215ENST00000628696 ADGRB2O60241 1585 aa27.81■■■□□ 2.04
SMN2-215ENST00000628696 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
SMN2-215ENST00000628696 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
SMN2-215ENST00000628696 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
SMN2-215ENST00000628696 GPRASP1Q5JY77 1395 aa27.78■■■□□ 2.04
SMN2-215ENST00000628696 EIF3AQ14152 1382 aaKnown RBP27.76■■■□□ 2.03
SMN2-215ENST00000628696 PRR36Q9H6K5 1346 aa27.76■■■□□ 2.03
SMN2-215ENST00000628696 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
SMN2-215ENST00000628696 NGDNQ8NEJ9 315 aaKnown RBP27.75■■■□□ 2.03
SMN2-215ENST00000628696 A0A0G2JS52 829 aa27.74■■■□□ 2.03
SMN2-215ENST00000628696 MYT1Q01538 1121 aa27.74■■■□□ 2.03
SMN2-215ENST00000628696 STAC3Q96MF2 364 aa27.74■■■□□ 2.03
SMN2-215ENST00000628696 TRPM3Q9HCF6 1732 aaPredicted RBP27.74■■■□□ 2.03
SMN2-215ENST00000628696 BLMP54132 1417 aaPredicted RBP27.74■■■□□ 2.03
SMN2-215ENST00000628696 SF3B2Q13435 895 aaKnown RBP27.73■■■□□ 2.03
SMN2-215ENST00000628696 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
SMN2-215ENST00000628696 PAK3O75914 559 aaPredicted RBP27.72■■■□□ 2.03
SMN2-215ENST00000628696 ONECUT3O60422 494 aaPredicted RBP27.71■■■□□ 2.03
SMN2-215ENST00000628696 BTG4Q9NY30 223 aa27.71■■■□□ 2.03
SMN2-215ENST00000628696 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
SMN2-215ENST00000628696 DEFB132Q7Z7B7 95 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms