RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
NR1I3-235ENST00000628566 PRAM1Q96QH2 718 aa11.12□□□□□ -0.63
NR1I3-235ENST00000628566 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
NR1I3-235ENST00000628566 NALCNQ8IZF0 1738 aa11.11□□□□□ -0.63
NR1I3-235ENST00000628566 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
NR1I3-235ENST00000628566 EIF3AQ14152 1382 aaKnown RBP11.11□□□□□ -0.63
NR1I3-235ENST00000628566 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
NR1I3-235ENST00000628566 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
NR1I3-235ENST00000628566 SAFB2Q14151 953 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-235ENST00000628566 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
NR1I3-235ENST00000628566 MST1RQ04912 1400 aa11.08□□□□□ -0.64
NR1I3-235ENST00000628566 ADRA2BP18089 450 aa11.07□□□□□ -0.64
NR1I3-235ENST00000628566 HSPA1LP34931 641 aa11.07□□□□□ -0.64
NR1I3-235ENST00000628566 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
NR1I3-235ENST00000628566 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
NR1I3-235ENST00000628566 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
NR1I3-235ENST00000628566 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
NR1I3-235ENST00000628566 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
NR1I3-235ENST00000628566 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
NR1I3-235ENST00000628566 CENPJQ9HC77 1338 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-235ENST00000628566 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
NR1I3-235ENST00000628566 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
NR1I3-235ENST00000628566 ADGRB2O60241 1585 aa11.05□□□□□ -0.64
NR1I3-235ENST00000628566 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
NR1I3-235ENST00000628566 MINK1Q8N4C8 1332 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-235ENST00000628566 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
NR1I3-235ENST00000628566 ANKARQ7Z5J8 1434 aa11.04□□□□□ -0.64
NR1I3-235ENST00000628566 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
NR1I3-235ENST00000628566 GPRASP1Q5JY77 1395 aa11.03□□□□□ -0.64
NR1I3-235ENST00000628566 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-235ENST00000628566 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
NR1I3-235ENST00000628566 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-235ENST00000628566 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
NR1I3-235ENST00000628566 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-235ENST00000628566 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
NR1I3-235ENST00000628566 LRRC59Q96AG4 307 aaKnown RBP11.02□□□□□ -0.65
NR1I3-235ENST00000628566 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
NR1I3-235ENST00000628566 TULP4Q9NRJ4 1543 aa11.01□□□□□ -0.65
NR1I3-235ENST00000628566 ORAI2Q96SN7 254 aa11.01□□□□□ -0.65
NR1I3-235ENST00000628566 EVC2Q86UK5 1308 aa11.01□□□□□ -0.65
NR1I3-235ENST00000628566 JCADQ9P266 1359 aa11.01□□□□□ -0.65
NR1I3-235ENST00000628566 NHSL1Q5SYE7 1610 aa11□□□□□ -0.65
NR1I3-235ENST00000628566 SRPK2P78362 688 aaKnown RBP11□□□□□ -0.65
NR1I3-235ENST00000628566 PSME1Q06323 249 aa11□□□□□ -0.65
NR1I3-235ENST00000628566 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
NR1I3-235ENST00000628566 QRICH2Q9H0J4 1663 aa11□□□□□ -0.65
NR1I3-235ENST00000628566 CDK19Q9BWU1 502 aa10.99□□□□□ -0.65
NR1I3-235ENST00000628566 ITSN1Q15811 1721 aa10.98□□□□□ -0.65
NR1I3-235ENST00000628566 FOXO3O43524 673 aa10.98□□□□□ -0.65
NR1I3-235ENST00000628566 SPATA31A6Q5VVP1 1343 aa10.98□□□□□ -0.65
NR1I3-235ENST00000628566 SBNO2Q9Y2G9 1366 aa10.98□□□□□ -0.65
NR1I3-235ENST00000628566 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
NR1I3-235ENST00000628566 NGDNQ8NEJ9 315 aaKnown RBP10.97□□□□□ -0.65
NR1I3-235ENST00000628566 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
NR1I3-235ENST00000628566 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
NR1I3-235ENST00000628566 SOS2Q07890 1332 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-235ENST00000628566 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 USP47Q96K76 1375 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
NR1I3-235ENST00000628566 KRT28Q7Z3Y7 464 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 PMFBP1Q8TBY8 1022 aa10.95□□□□□ -0.66
NR1I3-235ENST00000628566 ATP7BP35670 1465 aa10.94□□□□□ -0.66
NR1I3-235ENST00000628566 DDX17Q92841 729 aaKnown RBP10.94□□□□□ -0.66
NR1I3-235ENST00000628566 RGPD8O14715 1765 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-235ENST00000628566 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 ST20-MTHFSA0A0A6YYL1 179 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-235ENST00000628566 TMF1P82094 1093 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 USP32Q8NFA0 1604 aa10.93□□□□□ -0.66
NR1I3-235ENST00000628566 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 ARHGEF10O15013 1369 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-235ENST00000628566 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 XPCQ01831 940 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-235ENST00000628566 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 PUS7Q96PZ0 661 aaKnown RBP10.92□□□□□ -0.66
NR1I3-235ENST00000628566 PXDNQ92626 1479 aa10.92□□□□□ -0.66
NR1I3-235ENST00000628566 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 PNPLA6Q8IY17 1366 aa10.91□□□□□ -0.66
NR1I3-235ENST00000628566 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-235ENST00000628566 TOPAZ1Q8N9V7 1692 aa10.91□□□□□ -0.66
NR1I3-235ENST00000628566 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
NR1I3-235ENST00000628566 ACEP12821 1306 aa10.9□□□□□ -0.66
NR1I3-235ENST00000628566 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
NR1I3-235ENST00000628566 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.67
NR1I3-235ENST00000628566 NINLQ9Y2I6 1382 aa10.9□□□□□ -0.67
NR1I3-235ENST00000628566 HDGFL2Q7Z4V5 671 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-235ENST00000628566 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
NR1I3-235ENST00000628566 CABP1Q9NZU7 370 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms