RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
LINC00628-201ENST00000628516 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
LINC00628-201ENST00000628516 YTHDC2Q9H6S0 1430 aaKnown RBP24.17■■□□□ 1.46
LINC00628-201ENST00000628516 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
LINC00628-201ENST00000628516 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
LINC00628-201ENST00000628516 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
LINC00628-201ENST00000628516 MYOM2P54296 1465 aa24.15■■□□□ 1.46
LINC00628-201ENST00000628516 ESCO1Q5FWF5 840 aa24.15■■□□□ 1.46
LINC00628-201ENST00000628516 CFAP70Q5T0N1 1121 aa24.15■■□□□ 1.46
LINC00628-201ENST00000628516 SOS2Q07890 1332 aaPredicted RBP24.14■■□□□ 1.46
LINC00628-201ENST00000628516 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.46
LINC00628-201ENST00000628516 HRCP23327 699 aa24.14■■□□□ 1.45
LINC00628-201ENST00000628516 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
LINC00628-201ENST00000628516 LAMC1P11047 1609 aa24.13■■□□□ 1.45
LINC00628-201ENST00000628516 NUTM2FA1L443 756 aa24.12■■□□□ 1.45
LINC00628-201ENST00000628516 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
LINC00628-201ENST00000628516 SIRT1Q96EB6 747 aa24.1■■□□□ 1.45
LINC00628-201ENST00000628516 AFF2P51816 1311 aa24.1■■□□□ 1.45
LINC00628-201ENST00000628516 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
LINC00628-201ENST00000628516 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
LINC00628-201ENST00000628516 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
LINC00628-201ENST00000628516 FOXO3O43524 673 aa24.06■■□□□ 1.44
LINC00628-201ENST00000628516 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
LINC00628-201ENST00000628516 RXRBP28702 533 aa24.05■■□□□ 1.44
LINC00628-201ENST00000628516 DCAF11Q8TEB1 546 aa24.05■■□□□ 1.44
LINC00628-201ENST00000628516 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
LINC00628-201ENST00000628516 SAFB2Q14151 953 aaKnown RBP eCLIP24.04■■□□□ 1.44
LINC00628-201ENST00000628516 PRAM1Q96QH2 718 aa24.04■■□□□ 1.44
LINC00628-201ENST00000628516 NGLY1Q96IV0 654 aa24.02■■□□□ 1.44
LINC00628-201ENST00000628516 POGKQ9P215 609 aa24.02■■□□□ 1.44
LINC00628-201ENST00000628516 FMN2Q9NZ56 1722 aa24.01■■□□□ 1.43
LINC00628-201ENST00000628516 PXDNQ92626 1479 aa24.01■■□□□ 1.43
LINC00628-201ENST00000628516 STAC3Q96MF2 364 aa23.99■■□□□ 1.43
LINC00628-201ENST00000628516 QTRT2Q9H974 415 aaKnown RBP23.99■■□□□ 1.43
LINC00628-201ENST00000628516 TRAK1Q9UPV9 953 aa23.98■■□□□ 1.43
LINC00628-201ENST00000628516 DLC1Q96QB1 1528 aa23.98■■□□□ 1.43
LINC00628-201ENST00000628516 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
LINC00628-201ENST00000628516 COL22A1Q8NFW1 1626 aaPredicted RBP23.96■■□□□ 1.43
LINC00628-201ENST00000628516 PHF8Q9UPP1 1060 aa23.95■■□□□ 1.42
LINC00628-201ENST00000628516 KIF1AQ12756 1690 aa23.95■■□□□ 1.42
LINC00628-201ENST00000628516 RBM6P78332 1123 aaKnown RBP23.94■■□□□ 1.42
LINC00628-201ENST00000628516 KRT28Q7Z3Y7 464 aa23.94■■□□□ 1.42
LINC00628-201ENST00000628516 USP21Q9UK80 565 aa23.94■■□□□ 1.42
LINC00628-201ENST00000628516 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
LINC00628-201ENST00000628516 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
LINC00628-201ENST00000628516 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
LINC00628-201ENST00000628516 HIRIP3Q9BW71 556 aaPredicted RBP23.91■■□□□ 1.42
LINC00628-201ENST00000628516 FNBP4Q8N3X1 1017 aaPredicted RBP23.9■■□□□ 1.42
LINC00628-201ENST00000628516 MINK1Q8N4C8 1332 aaPredicted RBP23.89■■□□□ 1.42
LINC00628-201ENST00000628516 PSME1Q06323 249 aa23.89■■□□□ 1.41
LINC00628-201ENST00000628516 TRPC5Q9UL62 973 aaPredicted RBP23.88■■□□□ 1.41
LINC00628-201ENST00000628516 ADGRB2O60241 1585 aa23.87■■□□□ 1.41
LINC00628-201ENST00000628516 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
LINC00628-201ENST00000628516 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
LINC00628-201ENST00000628516 UPF1Q92900 1129 aaKnown RBP eCLIP23.87■■□□□ 1.41
LINC00628-201ENST00000628516 RGS12O14924 1447 aa23.86■■□□□ 1.41
LINC00628-201ENST00000628516 TNS3Q68CZ2 1445 aa23.84■■□□□ 1.41
LINC00628-201ENST00000628516 WASLO00401 505 aaPredicted RBP23.84■■□□□ 1.41
LINC00628-201ENST00000628516 USP32Q8NFA0 1604 aa23.84■■□□□ 1.41
LINC00628-201ENST00000628516 EIF3AQ14152 1382 aaKnown RBP23.83■■□□□ 1.41
LINC00628-201ENST00000628516 LMOD2Q6P5Q4 547 aa23.83■■□□□ 1.41
LINC00628-201ENST00000628516 MARF1Q9Y4F3 1742 aaKnown RBP23.82■■□□□ 1.4
LINC00628-201ENST00000628516 SBNO1A3KN83 1393 aa23.82■■□□□ 1.4
LINC00628-201ENST00000628516 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
LINC00628-201ENST00000628516 HAP1P54257 671 aaPredicted RBP23.82■■□□□ 1.4
LINC00628-201ENST00000628516 ATRNO75882 1429 aa23.82■■□□□ 1.4
LINC00628-201ENST00000628516 PRR36Q9H6K5 1346 aa23.81■■□□□ 1.4
LINC00628-201ENST00000628516 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
LINC00628-201ENST00000628516 TULP4Q9NRJ4 1543 aa23.79■■□□□ 1.4
LINC00628-201ENST00000628516 CABLES1Q8TDN4 633 aa23.79■■□□□ 1.4
LINC00628-201ENST00000628516 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
LINC00628-201ENST00000628516 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
LINC00628-201ENST00000628516 GPRASP1Q5JY77 1395 aa23.77■■□□□ 1.4
LINC00628-201ENST00000628516 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
LINC00628-201ENST00000628516 NBPF1Q3BBV0 1214 aa23.75■■□□□ 1.39
LINC00628-201ENST00000628516 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
LINC00628-201ENST00000628516 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
LINC00628-201ENST00000628516 KIAA1210Q9ULL0 1709 aa23.74■■□□□ 1.39
LINC00628-201ENST00000628516 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
LINC00628-201ENST00000628516 SLIT2O94813 1529 aa23.74■■□□□ 1.39
LINC00628-201ENST00000628516 NUDT16Q96DE0 195 aaKnown RBP23.72■■□□□ 1.39
LINC00628-201ENST00000628516 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
LINC00628-201ENST00000628516 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
LINC00628-201ENST00000628516 SIN3AQ96ST3 1273 aa23.7■■□□□ 1.38
LINC00628-201ENST00000628516 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.7■■□□□ 1.38
LINC00628-201ENST00000628516 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
LINC00628-201ENST00000628516 ATP7BP35670 1465 aa23.69■■□□□ 1.38
LINC00628-201ENST00000628516 PAK3O75914 559 aaPredicted RBP23.69■■□□□ 1.38
LINC00628-201ENST00000628516 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
LINC00628-201ENST00000628516 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
LINC00628-201ENST00000628516 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
LINC00628-201ENST00000628516 ITSN1Q15811 1721 aa23.66■■□□□ 1.38
LINC00628-201ENST00000628516 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
LINC00628-201ENST00000628516 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
LINC00628-201ENST00000628516 FAM83GA6ND36 823 aa23.65■■□□□ 1.38
LINC00628-201ENST00000628516 CCDC9Q9Y3X0 531 aaKnown RBP23.64■■□□□ 1.37
LINC00628-201ENST00000628516 CCDC61Q9Y6R9 512 aa23.64■■□□□ 1.37
LINC00628-201ENST00000628516 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
LINC00628-201ENST00000628516 GLI3P10071 1580 aa23.63■■□□□ 1.37
LINC00628-201ENST00000628516 VPS72Q15906 364 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms