RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
SOX2-OT-247ENST00000628347 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
SOX2-OT-247ENST00000628347 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
SOX2-OT-247ENST00000628347 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
SOX2-OT-247ENST00000628347 MSH5O43196 834 aa18.49■□□□□ 0.55
SOX2-OT-247ENST00000628347 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
SOX2-OT-247ENST00000628347 MYOM2P54296 1465 aa18.48■□□□□ 0.55
SOX2-OT-247ENST00000628347 AFF2P51816 1311 aa18.48■□□□□ 0.55
SOX2-OT-247ENST00000628347 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
SOX2-OT-247ENST00000628347 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
SOX2-OT-247ENST00000628347 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
SOX2-OT-247ENST00000628347 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 RXRBP28702 533 aa18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 STK26Q9P289 416 aa18.45■□□□□ 0.54
SOX2-OT-247ENST00000628347 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
SOX2-OT-247ENST00000628347 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
SOX2-OT-247ENST00000628347 PXDNQ92626 1479 aa18.43■□□□□ 0.54
SOX2-OT-247ENST00000628347 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
SOX2-OT-247ENST00000628347 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
SOX2-OT-247ENST00000628347 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
SOX2-OT-247ENST00000628347 HRCP23327 699 aa18.41■□□□□ 0.54
SOX2-OT-247ENST00000628347 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
SOX2-OT-247ENST00000628347 KIF1AQ12756 1690 aa18.39■□□□□ 0.53
SOX2-OT-247ENST00000628347 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
SOX2-OT-247ENST00000628347 DLC1Q96QB1 1528 aa18.39■□□□□ 0.53
SOX2-OT-247ENST00000628347 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-247ENST00000628347 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-247ENST00000628347 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
SOX2-OT-247ENST00000628347 NGLY1Q96IV0 654 aa18.37■□□□□ 0.53
SOX2-OT-247ENST00000628347 FOXO3O43524 673 aa18.36■□□□□ 0.53
SOX2-OT-247ENST00000628347 FNBP4Q8N3X1 1017 aaPredicted RBP18.36■□□□□ 0.53
SOX2-OT-247ENST00000628347 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
SOX2-OT-247ENST00000628347 ADGRB1O14514 1584 aa18.35■□□□□ 0.53
SOX2-OT-247ENST00000628347 RGS12O14924 1447 aa18.34■□□□□ 0.53
SOX2-OT-247ENST00000628347 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
SOX2-OT-247ENST00000628347 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
SOX2-OT-247ENST00000628347 MARF1Q9Y4F3 1742 aaKnown RBP18.34■□□□□ 0.53
SOX2-OT-247ENST00000628347 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
SOX2-OT-247ENST00000628347 USP21Q9UK80 565 aa18.32■□□□□ 0.52
SOX2-OT-247ENST00000628347 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
SOX2-OT-247ENST00000628347 ATRNO75882 1429 aa18.32■□□□□ 0.52
SOX2-OT-247ENST00000628347 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
SOX2-OT-247ENST00000628347 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-247ENST00000628347 TRPC5Q9UL62 973 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-247ENST00000628347 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-247ENST00000628347 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
SOX2-OT-247ENST00000628347 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
SOX2-OT-247ENST00000628347 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
SOX2-OT-247ENST00000628347 USP32Q8NFA0 1604 aa18.27■□□□□ 0.52
SOX2-OT-247ENST00000628347 BCL9LQ86UU0 1499 aa18.27■□□□□ 0.52
SOX2-OT-247ENST00000628347 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
SOX2-OT-247ENST00000628347 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
SOX2-OT-247ENST00000628347 POGKQ9P215 609 aa18.27■□□□□ 0.52
SOX2-OT-247ENST00000628347 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
SOX2-OT-247ENST00000628347 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-247ENST00000628347 PSME1Q06323 249 aa18.26■□□□□ 0.51
SOX2-OT-247ENST00000628347 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
SOX2-OT-247ENST00000628347 SLIT2O94813 1529 aa18.24■□□□□ 0.51
SOX2-OT-247ENST00000628347 TRAK1Q9UPV9 953 aa18.24■□□□□ 0.51
SOX2-OT-247ENST00000628347 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
SOX2-OT-247ENST00000628347 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
SOX2-OT-247ENST00000628347 TULP4Q9NRJ4 1543 aa18.22■□□□□ 0.51
SOX2-OT-247ENST00000628347 ARHGEF10O15013 1369 aa18.21■□□□□ 0.51
SOX2-OT-247ENST00000628347 ATAD2Q6PL18 1390 aa18.21■□□□□ 0.51
SOX2-OT-247ENST00000628347 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
SOX2-OT-247ENST00000628347 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
SOX2-OT-247ENST00000628347 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
SOX2-OT-247ENST00000628347 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-247ENST00000628347 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
SOX2-OT-247ENST00000628347 GJD4Q96KN9 370 aaPredicted RBP18.19■□□□□ 0.5
SOX2-OT-247ENST00000628347 KIAA1210Q9ULL0 1709 aa18.19■□□□□ 0.5
SOX2-OT-247ENST00000628347 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
SOX2-OT-247ENST00000628347 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
SOX2-OT-247ENST00000628347 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
SOX2-OT-247ENST00000628347 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
SOX2-OT-247ENST00000628347 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
SOX2-OT-247ENST00000628347 GLI3P10071 1580 aa18.17■□□□□ 0.5
SOX2-OT-247ENST00000628347 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
SOX2-OT-247ENST00000628347 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
SOX2-OT-247ENST00000628347 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
SOX2-OT-247ENST00000628347 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
SOX2-OT-247ENST00000628347 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-247ENST00000628347 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
SOX2-OT-247ENST00000628347 EP400Q96L91 3159 aa18.14■□□□□ 0.49
SOX2-OT-247ENST00000628347 ITSN1Q15811 1721 aa18.14■□□□□ 0.49
SOX2-OT-247ENST00000628347 ATP7BP35670 1465 aa18.14■□□□□ 0.49
SOX2-OT-247ENST00000628347 VPS72Q15906 364 aa18.12■□□□□ 0.49
SOX2-OT-247ENST00000628347 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
SOX2-OT-247ENST00000628347 CRYBG1Q9Y4K1 1723 aa18.1■□□□□ 0.49
SOX2-OT-247ENST00000628347 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
SOX2-OT-247ENST00000628347 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
SOX2-OT-247ENST00000628347 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
SOX2-OT-247ENST00000628347 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
SOX2-OT-247ENST00000628347 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
SOX2-OT-247ENST00000628347 FAM83GA6ND36 823 aa18.08■□□□□ 0.48
SOX2-OT-247ENST00000628347 ONECUT3O60422 494 aaPredicted RBP18.08■□□□□ 0.48
SOX2-OT-247ENST00000628347 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms