RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
UBR1-212ENST00000627960 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
UBR1-212ENST00000627960 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
UBR1-212ENST00000627960 CDC42BPGQ6DT37 1551 aa17.83■□□□□ 0.44
UBR1-212ENST00000627960 YTHDC2Q9H6S0 1430 aaKnown RBP17.82■□□□□ 0.44
UBR1-212ENST00000627960 NUTM2BA6NNL0 878 aaPredicted RBP17.81■□□□□ 0.44
UBR1-212ENST00000627960 NUTM2EB1AL46 878 aaPredicted RBP17.81■□□□□ 0.44
UBR1-212ENST00000627960 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
UBR1-212ENST00000627960 NUTM2AQ8IVF1 878 aaPredicted RBP17.81■□□□□ 0.44
UBR1-212ENST00000627960 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
UBR1-212ENST00000627960 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
UBR1-212ENST00000627960 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
UBR1-212ENST00000627960 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
UBR1-212ENST00000627960 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
UBR1-212ENST00000627960 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
UBR1-212ENST00000627960 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
UBR1-212ENST00000627960 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
UBR1-212ENST00000627960 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
UBR1-212ENST00000627960 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
UBR1-212ENST00000627960 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
UBR1-212ENST00000627960 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
UBR1-212ENST00000627960 STAC3Q96MF2 364 aa17.73■□□□□ 0.43
UBR1-212ENST00000627960 AFF2P51816 1311 aa17.72■□□□□ 0.43
UBR1-212ENST00000627960 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
UBR1-212ENST00000627960 ADGRB1O14514 1584 aa17.71■□□□□ 0.43
UBR1-212ENST00000627960 PXDNQ92626 1479 aa17.71■□□□□ 0.43
UBR1-212ENST00000627960 FOXO3O43524 673 aa17.71■□□□□ 0.43
UBR1-212ENST00000627960 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
UBR1-212ENST00000627960 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
UBR1-212ENST00000627960 DLC1Q96QB1 1528 aa17.71■□□□□ 0.43
UBR1-212ENST00000627960 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
UBR1-212ENST00000627960 C8orf37Q96NL8 207 aa17.69■□□□□ 0.42
UBR1-212ENST00000627960 POGKQ9P215 609 aa17.69■□□□□ 0.42
UBR1-212ENST00000627960 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
UBR1-212ENST00000627960 RXRBP28702 533 aa17.68■□□□□ 0.42
UBR1-212ENST00000627960 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
UBR1-212ENST00000627960 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBR1-212ENST00000627960 NGLY1Q96IV0 654 aa17.66■□□□□ 0.42
UBR1-212ENST00000627960 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
UBR1-212ENST00000627960 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
UBR1-212ENST00000627960 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
UBR1-212ENST00000627960 ADGRB2O60241 1585 aa17.64■□□□□ 0.41
UBR1-212ENST00000627960 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
UBR1-212ENST00000627960 MARF1Q9Y4F3 1742 aaKnown RBP17.63■□□□□ 0.41
UBR1-212ENST00000627960 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
UBR1-212ENST00000627960 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
UBR1-212ENST00000627960 SPATA31A3Q5VYP0 1347 aa17.62■□□□□ 0.41
UBR1-212ENST00000627960 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
UBR1-212ENST00000627960 ANKARQ7Z5J8 1434 aa17.61■□□□□ 0.41
UBR1-212ENST00000627960 PSME1Q06323 249 aa17.6■□□□□ 0.41
UBR1-212ENST00000627960 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
UBR1-212ENST00000627960 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
UBR1-212ENST00000627960 MINK1Q8N4C8 1332 aaPredicted RBP17.6■□□□□ 0.41
UBR1-212ENST00000627960 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
UBR1-212ENST00000627960 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
UBR1-212ENST00000627960 USP21Q9UK80 565 aa17.59■□□□□ 0.41
UBR1-212ENST00000627960 WASLO00401 505 aaPredicted RBP17.57■□□□□ 0.4
UBR1-212ENST00000627960 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
UBR1-212ENST00000627960 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
UBR1-212ENST00000627960 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
UBR1-212ENST00000627960 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
UBR1-212ENST00000627960 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
UBR1-212ENST00000627960 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
UBR1-212ENST00000627960 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
UBR1-212ENST00000627960 RGS12O14924 1447 aa17.55■□□□□ 0.4
UBR1-212ENST00000627960 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBR1-212ENST00000627960 ATRNO75882 1429 aa17.54■□□□□ 0.4
UBR1-212ENST00000627960 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
UBR1-212ENST00000627960 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
UBR1-212ENST00000627960 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.39
UBR1-212ENST00000627960 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
UBR1-212ENST00000627960 ARHGEF10O15013 1369 aa17.51■□□□□ 0.39
UBR1-212ENST00000627960 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
UBR1-212ENST00000627960 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
UBR1-212ENST00000627960 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
UBR1-212ENST00000627960 SLIT2O94813 1529 aa17.49■□□□□ 0.39
UBR1-212ENST00000627960 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
UBR1-212ENST00000627960 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
UBR1-212ENST00000627960 ALS2Q96Q42 1657 aa17.48■□□□□ 0.39
UBR1-212ENST00000627960 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
UBR1-212ENST00000627960 UNC5CLQ8IV45 518 aa17.48■□□□□ 0.39
UBR1-212ENST00000627960 NGDNQ8NEJ9 315 aaKnown RBP17.48■□□□□ 0.39
UBR1-212ENST00000627960 ATP7BP35670 1465 aa17.48■□□□□ 0.39
UBR1-212ENST00000627960 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
UBR1-212ENST00000627960 NWD2Q9ULI1 1742 aa17.45■□□□□ 0.38
UBR1-212ENST00000627960 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
UBR1-212ENST00000627960 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
UBR1-212ENST00000627960 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
UBR1-212ENST00000627960 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
UBR1-212ENST00000627960 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
UBR1-212ENST00000627960 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
UBR1-212ENST00000627960 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
UBR1-212ENST00000627960 GLI3P10071 1580 aa17.42■□□□□ 0.38
UBR1-212ENST00000627960 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
UBR1-212ENST00000627960 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms