RNA–Protein interactions for RNA: ENST00000627781.2

ZNF544-220, Transcript of zinc finger protein 544, humanhuman

TSL 2 BASIC

Gene ZNF544, Length 383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-220ENST00000627781 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
ZNF544-220ENST00000627781 HSPA2P54652 639 aa13.67□□□□□ -0.22
ZNF544-220ENST00000627781 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
ZNF544-220ENST00000627781 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
ZNF544-220ENST00000627781 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
ZNF544-220ENST00000627781 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
ZNF544-220ENST00000627781 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
ZNF544-220ENST00000627781 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
ZNF544-220ENST00000627781 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
ZNF544-220ENST00000627781 ATAD2Q6PL18 1390 aa13.65□□□□□ -0.22
ZNF544-220ENST00000627781 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
ZNF544-220ENST00000627781 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
ZNF544-220ENST00000627781 WASLO00401 505 aaPredicted RBP13.63□□□□□ -0.23
ZNF544-220ENST00000627781 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
ZNF544-220ENST00000627781 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
ZNF544-220ENST00000627781 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
ZNF544-220ENST00000627781 SAFB2Q14151 953 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZNF544-220ENST00000627781 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
ZNF544-220ENST00000627781 SRPK2P78362 688 aaKnown RBP13.59□□□□□ -0.23
ZNF544-220ENST00000627781 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.23
ZNF544-220ENST00000627781 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
ZNF544-220ENST00000627781 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
ZNF544-220ENST00000627781 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
ZNF544-220ENST00000627781 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
ZNF544-220ENST00000627781 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.24
ZNF544-220ENST00000627781 ADGRL3Q9HAR2 1447 aa13.57□□□□□ -0.24
ZNF544-220ENST00000627781 POLR3GLQ9BT43 218 aa13.57□□□□□ -0.24
ZNF544-220ENST00000627781 PANK3Q9H999 370 aa13.57□□□□□ -0.24
ZNF544-220ENST00000627781 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
ZNF544-220ENST00000627781 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
ZNF544-220ENST00000627781 MYOM1P52179 1685 aa13.56□□□□□ -0.24
ZNF544-220ENST00000627781 DCCP43146 1447 aa13.56□□□□□ -0.24
ZNF544-220ENST00000627781 PROSER2Q86WR7 435 aaPredicted RBP13.56□□□□□ -0.24
ZNF544-220ENST00000627781 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
ZNF544-220ENST00000627781 ATP7BP35670 1465 aa13.55□□□□□ -0.24
ZNF544-220ENST00000627781 ANP32CO43423 234 aa13.55□□□□□ -0.24
ZNF544-220ENST00000627781 NUDT16Q96DE0 195 aaKnown RBP13.55□□□□□ -0.24
ZNF544-220ENST00000627781 C19orf44Q9H6X5 657 aa13.55□□□□□ -0.24
ZNF544-220ENST00000627781 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
ZNF544-220ENST00000627781 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
ZNF544-220ENST00000627781 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
ZNF544-220ENST00000627781 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
ZNF544-220ENST00000627781 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
ZNF544-220ENST00000627781 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.25
ZNF544-220ENST00000627781 NALCNQ8IZF0 1738 aa13.51□□□□□ -0.25
ZNF544-220ENST00000627781 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
ZNF544-220ENST00000627781 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
ZNF544-220ENST00000627781 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
ZNF544-220ENST00000627781 RALBP1Q15311 655 aa13.51□□□□□ -0.25
ZNF544-220ENST00000627781 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
ZNF544-220ENST00000627781 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-220ENST00000627781 NSD2O96028 1365 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-220ENST00000627781 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
ZNF544-220ENST00000627781 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
ZNF544-220ENST00000627781 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
ZNF544-220ENST00000627781 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
ZNF544-220ENST00000627781 MIER1Q8N108 512 aa13.49□□□□□ -0.25
ZNF544-220ENST00000627781 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
ZNF544-220ENST00000627781 POLR3AO14802 1390 aaPredicted RBP13.48□□□□□ -0.25
ZNF544-220ENST00000627781 MSH6P52701 1360 aa13.48□□□□□ -0.25
ZNF544-220ENST00000627781 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
ZNF544-220ENST00000627781 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
ZNF544-220ENST00000627781 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
ZNF544-220ENST00000627781 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
ZNF544-220ENST00000627781 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
ZNF544-220ENST00000627781 EDC4Q6P2E9 1401 aaKnown RBP13.47□□□□□ -0.25
ZNF544-220ENST00000627781 ATF3P18847 181 aa13.46□□□□□ -0.25
ZNF544-220ENST00000627781 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
ZNF544-220ENST00000627781 ACEP12821 1306 aa13.44□□□□□ -0.26
ZNF544-220ENST00000627781 C1orf167Q5SNV9 1468 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 LTBP4Q8N2S1 1624 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 MST1RQ04912 1400 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
ZNF544-220ENST00000627781 TTC21AQ8NDW8 1320 aa13.42□□□□□ -0.26
ZNF544-220ENST00000627781 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
ZNF544-220ENST00000627781 USP6P35125 1406 aa13.42□□□□□ -0.26
ZNF544-220ENST00000627781 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
ZNF544-220ENST00000627781 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
ZNF544-220ENST00000627781 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
ZNF544-220ENST00000627781 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
ZNF544-220ENST00000627781 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
ZNF544-220ENST00000627781 FYB1O15117 783 aa13.4□□□□□ -0.26
ZNF544-220ENST00000627781 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
ZNF544-220ENST00000627781 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
ZNF544-220ENST00000627781 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
ZNF544-220ENST00000627781 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
ZNF544-220ENST00000627781 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
ZNF544-220ENST00000627781 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
ZNF544-220ENST00000627781 IQSEC2Q5JU85 1478 aa13.38□□□□□ -0.27
ZNF544-220ENST00000627781 USP31Q70CQ4 1352 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms