RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
PTBP1-220ENST00000627714 PIK3C2BO00750 1634 aa24.89■■□□□ 1.57
PTBP1-220ENST00000627714 WWC1Q8IX03 1113 aa24.88■■□□□ 1.57
PTBP1-220ENST00000627714 SKAP1Q86WV1 359 aa24.88■■□□□ 1.57
PTBP1-220ENST00000627714 GLI2P10070 1586 aa24.87■■□□□ 1.57
PTBP1-220ENST00000627714 NSD2O96028 1365 aa24.87■■□□□ 1.57
PTBP1-220ENST00000627714 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
PTBP1-220ENST00000627714 GGT6Q6P531 493 aa24.86■■□□□ 1.57
PTBP1-220ENST00000627714 RUNDC1Q96C34 613 aa24.86■■□□□ 1.57
PTBP1-220ENST00000627714 BCAR3O75815 825 aa24.86■■□□□ 1.57
PTBP1-220ENST00000627714 NCBP3Q53F19 620 aaKnown RBP24.86■■□□□ 1.57
PTBP1-220ENST00000627714 NEO1Q92859 1461 aa24.85■■□□□ 1.57
PTBP1-220ENST00000627714 CFAP65Q6ZU64 1925 aaKnown RBP24.84■■□□□ 1.57
PTBP1-220ENST00000627714 SLC12A5Q9H2X9 1139 aa24.84■■□□□ 1.57
PTBP1-220ENST00000627714 ARHGEF28Q8N1W1 1705 aaKnown RBP24.84■■□□□ 1.57
PTBP1-220ENST00000627714 AAMPQ13685 434 aa24.83■■□□□ 1.57
PTBP1-220ENST00000627714 C8orf34Q49A92 452 aa24.83■■□□□ 1.57
PTBP1-220ENST00000627714 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
PTBP1-220ENST00000627714 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
PTBP1-220ENST00000627714 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
PTBP1-220ENST00000627714 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
PTBP1-220ENST00000627714 NEXMIFQ5QGS0 1516 aa24.82■■□□□ 1.56
PTBP1-220ENST00000627714 PHF23Q9BUL5 403 aaPredicted RBP24.82■■□□□ 1.56
PTBP1-220ENST00000627714 ANKRD36BQ8N2N9 1353 aa24.81■■□□□ 1.56
PTBP1-220ENST00000627714 WDR63Q8IWG1 891 aa24.81■■□□□ 1.56
PTBP1-220ENST00000627714 ARHGAP31Q2M1Z3 1444 aa24.81■■□□□ 1.56
PTBP1-220ENST00000627714 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
PTBP1-220ENST00000627714 CCDC27Q2M243 656 aa24.81■■□□□ 1.56
PTBP1-220ENST00000627714 TULP4Q9NRJ4 1543 aa24.79■■□□□ 1.56
PTBP1-220ENST00000627714 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
PTBP1-220ENST00000627714 NEFMP07197 916 aa24.78■■□□□ 1.56
PTBP1-220ENST00000627714 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
PTBP1-220ENST00000627714 ZFYVE9O95405 1425 aa24.77■■□□□ 1.56
PTBP1-220ENST00000627714 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
PTBP1-220ENST00000627714 LAS1LQ9Y4W2 734 aaKnown RBP24.77■■□□□ 1.56
PTBP1-220ENST00000627714 TCP11L2Q8N4U5 519 aa24.77■■□□□ 1.56
PTBP1-220ENST00000627714 CLUAP1Q96AJ1 413 aa24.77■■□□□ 1.56
PTBP1-220ENST00000627714 DIP2CQ9Y2E4 1556 aa24.76■■□□□ 1.55
PTBP1-220ENST00000627714 DAXXQ9UER7 740 aaPredicted RBP24.76■■□□□ 1.55
PTBP1-220ENST00000627714 MTHFSP49914 203 aa24.75■■□□□ 1.55
PTBP1-220ENST00000627714 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
PTBP1-220ENST00000627714 RGS3P49796 1198 aa24.74■■□□□ 1.55
PTBP1-220ENST00000627714 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
PTBP1-220ENST00000627714 OSCARQ8IYS5 282 aa24.73■■□□□ 1.55
PTBP1-220ENST00000627714 RARSP54136 660 aaKnown RBP24.73■■□□□ 1.55
PTBP1-220ENST00000627714 ADGRB2O60241 1585 aa24.72■■□□□ 1.55
PTBP1-220ENST00000627714 IGHDP01880 384 aa24.7■■□□□ 1.54
PTBP1-220ENST00000627714 MYH16Q9H6N6 1097 aa24.7■■□□□ 1.54
PTBP1-220ENST00000627714 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
PTBP1-220ENST00000627714 ZMYM3Q14202 1370 aa24.69■■□□□ 1.54
PTBP1-220ENST00000627714 PMFBP1Q8TBY8 1022 aa24.69■■□□□ 1.54
PTBP1-220ENST00000627714 COG6Q9Y2V7 657 aa24.69■■□□□ 1.54
PTBP1-220ENST00000627714 NEUROD2Q15784 382 aa24.68■■□□□ 1.54
PTBP1-220ENST00000627714 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
PTBP1-220ENST00000627714 RICTORQ6R327 1708 aa24.68■■□□□ 1.54
PTBP1-220ENST00000627714 PANK1Q8TE04 598 aa24.67■■□□□ 1.54
PTBP1-220ENST00000627714 RRP7AQ9Y3A4 280 aaKnown RBP24.67■■□□□ 1.54
PTBP1-220ENST00000627714 CT47B1P0C2W7 299 aaPredicted RBP24.66■■□□□ 1.54
PTBP1-220ENST00000627714 FRAT1Q92837 279 aaPredicted RBP24.65■■□□□ 1.54
PTBP1-220ENST00000627714 RAPGEF3O95398 923 aa24.63■■□□□ 1.53
PTBP1-220ENST00000627714 ATAD2Q6PL18 1390 aa24.63■■□□□ 1.53
PTBP1-220ENST00000627714 MED14O60244 1454 aa24.63■■□□□ 1.53
PTBP1-220ENST00000627714 ANKRD26Q9UPS8 1709 aa24.63■■□□□ 1.53
PTBP1-220ENST00000627714 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
PTBP1-220ENST00000627714 U2AF1L5P0DN76 240 aaPredicted RBP24.62■■□□□ 1.53
PTBP1-220ENST00000627714 U2AF1Q01081 240 aaKnown RBP eCLIP24.62■■□□□ 1.539e-17■■□□□ 14.4
PTBP1-220ENST00000627714 IDI1Q13907 227 aa24.62■■□□□ 1.53
PTBP1-220ENST00000627714 CABP2Q9NPB3 220 aa24.62■■□□□ 1.53
PTBP1-220ENST00000627714 PREX1Q8TCU6 1659 aa24.61■■□□□ 1.53
PTBP1-220ENST00000627714 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
PTBP1-220ENST00000627714 TMEM131LA2VDJ0 1609 aa24.61■■□□□ 1.53
PTBP1-220ENST00000627714 PTPRMP28827 1452 aa24.59■■□□□ 1.53
PTBP1-220ENST00000627714 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
PTBP1-220ENST00000627714 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
PTBP1-220ENST00000627714 NFKBIBQ15653 356 aa24.57■■□□□ 1.52
PTBP1-220ENST00000627714 TERF2IPQ9NYB0 399 aa24.57■■□□□ 1.52
PTBP1-220ENST00000627714 MYO5BQ9ULV0 1848 aa24.57■■□□□ 1.52
PTBP1-220ENST00000627714 SRPK2P78362 688 aaKnown RBP24.56■■□□□ 1.52
PTBP1-220ENST00000627714 RWDD1Q9H446 243 aaPredicted RBP24.56■■□□□ 1.52
PTBP1-220ENST00000627714 SLC4A3P48751 1232 aa24.55■■□□□ 1.52
PTBP1-220ENST00000627714 RLBP1P12271 317 aa24.55■■□□□ 1.52
PTBP1-220ENST00000627714 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
PTBP1-220ENST00000627714 IL16Q14005 1332 aa24.53■■□□□ 1.52
PTBP1-220ENST00000627714 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
PTBP1-220ENST00000627714 MVPQ14764 893 aaKnown RBP24.53■■□□□ 1.52
PTBP1-220ENST00000627714 PLEKHF1Q96S99 279 aa24.53■■□□□ 1.52
PTBP1-220ENST00000627714 PCDHB15Q9Y5E8 787 aa24.53■■□□□ 1.52
PTBP1-220ENST00000627714 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
PTBP1-220ENST00000627714 USP19O94966 1318 aa24.52■■□□□ 1.52
PTBP1-220ENST00000627714 PNNQ9H307 717 aaKnown RBP24.52■■□□□ 1.52
PTBP1-220ENST00000627714 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
PTBP1-220ENST00000627714 CD163L1Q9NR16 1453 aa24.51■■□□□ 1.51
PTBP1-220ENST00000627714 SAFB2Q14151 953 aaKnown RBP eCLIP24.51■■□□□ 1.51
PTBP1-220ENST00000627714 STK26Q9P289 416 aa24.5■■□□□ 1.51
PTBP1-220ENST00000627714 TMPOP42166 694 aaKnown RBP24.5■■□□□ 1.51
PTBP1-220ENST00000627714 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
PTBP1-220ENST00000627714 DZIP1LQ8IYY4 767 aaKnown RBP24.49■■□□□ 1.51
PTBP1-220ENST00000627714 BECN1Q14457 450 aa24.49■■□□□ 1.51
PTBP1-220ENST00000627714 FTSJ3Q8IY81 847 aaKnown RBP24.49■■□□□ 1.51
PTBP1-220ENST00000627714 POGKQ9P215 609 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms