RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TMEM131LA2VDJ0 1609 aa9.57□□□□□ -0.88
CTNNA1-244ENST00000627109 NUTM2DQ5VT03 806 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-244ENST00000627109 MYO5BQ9ULV0 1848 aa9.56□□□□□ -0.88
CTNNA1-244ENST00000627109 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 SETD1AO15047 1707 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 RPGRIP1LQ68CZ1 1315 aa9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 PPP2R1AP30153 589 aa9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 PUS7Q96PZ0 661 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 VIRMAQ69YN4 1812 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-244ENST00000627109 TULP4Q9NRJ4 1543 aa9.54□□□□□ -0.88
CTNNA1-244ENST00000627109 ADGRB2O60241 1585 aa9.53□□□□□ -0.88
CTNNA1-244ENST00000627109 ADGRF5Q8IZF2 1346 aa9.53□□□□□ -0.88
CTNNA1-244ENST00000627109 RCAN3Q9UKA8 241 aa9.53□□□□□ -0.88
CTNNA1-244ENST00000627109 PLEKHH1Q9ULM0 1364 aa9.53□□□□□ -0.88
CTNNA1-244ENST00000627109 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-244ENST00000627109 HSPA2P54652 639 aa9.52□□□□□ -0.89
CTNNA1-244ENST00000627109 C14orf93Q9H972 538 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-244ENST00000627109 AGLP35573 1532 aa9.51□□□□□ -0.89
CTNNA1-244ENST00000627109 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
CTNNA1-244ENST00000627109 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
CTNNA1-244ENST00000627109 KDM4FA0A1W2PPD8 638 aa9.5□□□□□ -0.89
CTNNA1-244ENST00000627109 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-244ENST00000627109 MED14O60244 1454 aa9.49□□□□□ -0.89
CTNNA1-244ENST00000627109 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
CTNNA1-244ENST00000627109 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
CTNNA1-244ENST00000627109 KNSTRNQ9Y448 316 aa9.49□□□□□ -0.89
CTNNA1-244ENST00000627109 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
CTNNA1-244ENST00000627109 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 ZMYM3Q14202 1370 aa9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 KIF20BQ96Q89 1820 aa9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 PTPRMP28827 1452 aa9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 CFAP65Q6ZU64 1925 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-244ENST00000627109 CDC42BPGQ6DT37 1551 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 NSD2O96028 1365 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 SPATA31D1Q6ZQQ2 1576 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 MS4A1P11836 297 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 DLC1Q96QB1 1528 aa9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-244ENST00000627109 NINLQ9Y2I6 1382 aa9.46□□□□□ -0.89
CTNNA1-244ENST00000627109 IDI1Q13907 227 aa9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 EXOC6Q8TAG9 804 aa9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 COL3A1P02461 1466 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 SLFN5Q08AF3 891 aa9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 NLRP1Q9C000 1473 aa9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 CENPJQ9HC77 1338 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-244ENST00000627109 TCERG1O14776 1098 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-244ENST00000627109 NRXN3Q9Y4C0 1643 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 DHX37Q8IY37 1157 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 ANKRD36BQ8N2N9 1353 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 ALKQ9UM73 1620 aa9.44□□□□□ -0.9
CTNNA1-244ENST00000627109 NSD3Q9BZ95 1437 aa9.43□□□□□ -0.9
CTNNA1-244ENST00000627109 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
CTNNA1-244ENST00000627109 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 CDK11BP21127 795 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 NBR1Q14596 966 aa9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 ZBTB22O15209 634 aa9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 THEMISQ8N1K5 641 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-244ENST00000627109 ABCC11Q96J66 1382 aa9.41□□□□□ -0.9
CTNNA1-244ENST00000627109 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
CTNNA1-244ENST00000627109 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
CTNNA1-244ENST00000627109 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
CTNNA1-244ENST00000627109 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
CTNNA1-244ENST00000627109 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
CTNNA1-244ENST00000627109 SLC52A1Q9NWF4 448 aa9.4□□□□□ -0.9
CTNNA1-244ENST00000627109 MON2Q7Z3U7 1717 aa9.4□□□□□ -0.9
CTNNA1-244ENST00000627109 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.91
CTNNA1-244ENST00000627109 AKAP12Q02952 1782 aa9.4□□□□□ -0.91
CTNNA1-244ENST00000627109 HDGFP51858 240 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 STK26Q9P289 416 aa9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 TNRQ92752 1358 aa9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 E9PSI1 815 aa9.39□□□□□ -0.91
CTNNA1-244ENST00000627109 VGFO15240 615 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-244ENST00000627109 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
CTNNA1-244ENST00000627109 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-244ENST00000627109 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 NCKAP5LQ9HCH0 1330 aa9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 PDIA4P13667 645 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 C20orf194Q5TEA3 1177 aa9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 A2ML1A8K2U0 1454 aa9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 TOPAZ1Q8N9V7 1692 aa9.37□□□□□ -0.91
CTNNA1-244ENST00000627109 CPS1P31327 1500 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 ATP7BP35670 1465 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 NRKQ7Z2Y5 1582 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms