RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
SNRPA1-216ENST00000626000 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-216ENST00000626000 HSPA1LP34931 641 aa20.05■□□□□ 0.8
SNRPA1-216ENST00000626000 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
SNRPA1-216ENST00000626000 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
SNRPA1-216ENST00000626000 AHDC1Q5TGY3 1603 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-216ENST00000626000 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
SNRPA1-216ENST00000626000 WAPLQ7Z5K2 1190 aa20.03■□□□□ 0.8
SNRPA1-216ENST00000626000 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-216ENST00000626000 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
SNRPA1-216ENST00000626000 C1orf167Q5SNV9 1468 aa20.01■□□□□ 0.79
SNRPA1-216ENST00000626000 DISP3Q9P2K9 1392 aa20.01■□□□□ 0.79
SNRPA1-216ENST00000626000 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
SNRPA1-216ENST00000626000 PHLPP1O60346 1717 aa20■□□□□ 0.79
SNRPA1-216ENST00000626000 FMN2Q9NZ56 1722 aa20■□□□□ 0.79
SNRPA1-216ENST00000626000 BRINP3Q76B58 766 aa20■□□□□ 0.79
SNRPA1-216ENST00000626000 ROCK2O75116 1388 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-216ENST00000626000 ANKARQ7Z5J8 1434 aa19.98■□□□□ 0.79
SNRPA1-216ENST00000626000 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
SNRPA1-216ENST00000626000 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-216ENST00000626000 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
SNRPA1-216ENST00000626000 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
SNRPA1-216ENST00000626000 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
SNRPA1-216ENST00000626000 NBPF1Q3BBV0 1214 aa19.95■□□□□ 0.78
SNRPA1-216ENST00000626000 COL16A1Q07092 1604 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-216ENST00000626000 JCADQ9P266 1359 aa19.94■□□□□ 0.78
SNRPA1-216ENST00000626000 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNRPA1-216ENST00000626000 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-216ENST00000626000 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
SNRPA1-216ENST00000626000 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
SNRPA1-216ENST00000626000 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
SNRPA1-216ENST00000626000 WASLO00401 505 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-216ENST00000626000 LRRC59Q96AG4 307 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-216ENST00000626000 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-216ENST00000626000 ITSN1Q15811 1721 aa19.89■□□□□ 0.77
SNRPA1-216ENST00000626000 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
SNRPA1-216ENST00000626000 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 QRICH2Q9H0J4 1663 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 CARD11Q9BXL7 1154 aa19.88■□□□□ 0.77
SNRPA1-216ENST00000626000 SOCS7O14512 581 aa19.87■□□□□ 0.77
SNRPA1-216ENST00000626000 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-216ENST00000626000 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
SNRPA1-216ENST00000626000 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-216ENST00000626000 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
SNRPA1-216ENST00000626000 MED1Q15648 1581 aaPredicted RBP19.84■□□□□ 0.77
SNRPA1-216ENST00000626000 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
SNRPA1-216ENST00000626000 NUTM2FA1L443 756 aa19.83■□□□□ 0.77
SNRPA1-216ENST00000626000 RGPD8O14715 1765 aaPredicted RBP19.83■□□□□ 0.76
SNRPA1-216ENST00000626000 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
SNRPA1-216ENST00000626000 PSME1Q06323 249 aa19.82■□□□□ 0.76
SNRPA1-216ENST00000626000 ATP7BP35670 1465 aa19.81■□□□□ 0.76
SNRPA1-216ENST00000626000 PXDNQ92626 1479 aa19.8■□□□□ 0.76
SNRPA1-216ENST00000626000 FOXO3O43524 673 aa19.8■□□□□ 0.76
SNRPA1-216ENST00000626000 CDK19Q9BWU1 502 aa19.8■□□□□ 0.76
SNRPA1-216ENST00000626000 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
SNRPA1-216ENST00000626000 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-216ENST00000626000 NUDT16Q96DE0 195 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-216ENST00000626000 TOPAZ1Q8N9V7 1692 aa19.78■□□□□ 0.76
SNRPA1-216ENST00000626000 SBNO1A3KN83 1393 aa19.77■□□□□ 0.76
SNRPA1-216ENST00000626000 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
SNRPA1-216ENST00000626000 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
SNRPA1-216ENST00000626000 COL22A1Q8NFW1 1626 aaPredicted RBP19.76■□□□□ 0.75
SNRPA1-216ENST00000626000 ILDR2Q71H61 639 aa19.76■□□□□ 0.75
SNRPA1-216ENST00000626000 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
SNRPA1-216ENST00000626000 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
SNRPA1-216ENST00000626000 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
SNRPA1-216ENST00000626000 NGDNQ8NEJ9 315 aaKnown RBP19.75■□□□□ 0.75
SNRPA1-216ENST00000626000 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
SNRPA1-216ENST00000626000 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
SNRPA1-216ENST00000626000 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
SNRPA1-216ENST00000626000 PUS7Q96PZ0 661 aaKnown RBP19.73■□□□□ 0.75
SNRPA1-216ENST00000626000 TNS3Q68CZ2 1445 aa19.73■□□□□ 0.75
SNRPA1-216ENST00000626000 SPATA31A3Q5VYP0 1347 aa19.73■□□□□ 0.75
SNRPA1-216ENST00000626000 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
SNRPA1-216ENST00000626000 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
SNRPA1-216ENST00000626000 USP47Q96K76 1375 aa19.71■□□□□ 0.75
SNRPA1-216ENST00000626000 PPIP5K1Q6PFW1 1433 aa19.71■□□□□ 0.75
SNRPA1-216ENST00000626000 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
SNRPA1-216ENST00000626000 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
SNRPA1-216ENST00000626000 TRPM3Q9HCF6 1732 aaPredicted RBP19.68■□□□□ 0.74
SNRPA1-216ENST00000626000 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
SNRPA1-216ENST00000626000 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
SNRPA1-216ENST00000626000 NINLQ9Y2I6 1382 aa19.67■□□□□ 0.74
SNRPA1-216ENST00000626000 LRP6O75581 1613 aa19.66■□□□□ 0.74
SNRPA1-216ENST00000626000 ST20-MTHFSA0A0A6YYL1 179 aa19.66■□□□□ 0.74
SNRPA1-216ENST00000626000 ACEP12821 1306 aa19.66■□□□□ 0.74
SNRPA1-216ENST00000626000 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-216ENST00000626000 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-216ENST00000626000 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-216ENST00000626000 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-216ENST00000626000 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
SNRPA1-216ENST00000626000 ZNF772Q68DY9 489 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-216ENST00000626000 TMF1P82094 1093 aa19.63■□□□□ 0.73
SNRPA1-216ENST00000626000 TESK2Q96S53 571 aa19.63■□□□□ 0.73
SNRPA1-216ENST00000626000 HAP1P54257 671 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-216ENST00000626000 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
SNRPA1-216ENST00000626000 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms