RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 FECHP22830 423 aa11.38□□□□□ -0.59
TCF4-250ENST00000625849 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
TCF4-250ENST00000625849 ATP13A2Q9NQ11 1180 aa11.38□□□□□ -0.59
TCF4-250ENST00000625849 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
TCF4-250ENST00000625849 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
TCF4-250ENST00000625849 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
TCF4-250ENST00000625849 TRIM32Q13049 653 aa11.35□□□□□ -0.59
TCF4-250ENST00000625849 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
TCF4-250ENST00000625849 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
TCF4-250ENST00000625849 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
TCF4-250ENST00000625849 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
TCF4-250ENST00000625849 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
TCF4-250ENST00000625849 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
TCF4-250ENST00000625849 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
TCF4-250ENST00000625849 TESPA1A2RU30 521 aaPredicted RBP11.32□□□□□ -0.6
TCF4-250ENST00000625849 J3QL48 77 aa11.32□□□□□ -0.6
TCF4-250ENST00000625849 GPR37O15354 613 aa11.32□□□□□ -0.6
TCF4-250ENST00000625849 MMP16P51512 607 aa11.31□□□□□ -0.6
TCF4-250ENST00000625849 Q3C1V9 767 aa11.31□□□□□ -0.6
TCF4-250ENST00000625849 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
TCF4-250ENST00000625849 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
TCF4-250ENST00000625849 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
TCF4-250ENST00000625849 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
TCF4-250ENST00000625849 HPS1Q92902 700 aa11.27□□□□□ -0.61
TCF4-250ENST00000625849 DXOO77932 396 aaKnown RBP11.24□□□□□ -0.61
TCF4-250ENST00000625849 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
TCF4-250ENST00000625849 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
TCF4-250ENST00000625849 CD46P15529 392 aa11.21□□□□□ -0.61
TCF4-250ENST00000625849 WNT7BP56706 349 aa11.21□□□□□ -0.61
TCF4-250ENST00000625849 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
TCF4-250ENST00000625849 SKOR1P84550 965 aa11.2□□□□□ -0.62
TCF4-250ENST00000625849 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
TCF4-250ENST00000625849 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
TCF4-250ENST00000625849 KDM4AO75164 1064 aa11.18□□□□□ -0.62
TCF4-250ENST00000625849 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
TCF4-250ENST00000625849 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
TCF4-250ENST00000625849 USP46P62068 366 aa11.15□□□□□ -0.62
TCF4-250ENST00000625849 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
TCF4-250ENST00000625849 HLA-CQ95604 372 aa11.13□□□□□ -0.63
TCF4-250ENST00000625849 GMPRP36959 345 aa11.11□□□□□ -0.63
TCF4-250ENST00000625849 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
TCF4-250ENST00000625849 HOXA2O43364 376 aa11.1□□□□□ -0.63
TCF4-250ENST00000625849 JUNDP17535 347 aa11.1□□□□□ -0.63
TCF4-250ENST00000625849 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
TCF4-250ENST00000625849 IRF7Q92985 503 aa11.1□□□□□ -0.63
TCF4-250ENST00000625849 BMP1P13497 986 aa11.09□□□□□ -0.63
TCF4-250ENST00000625849 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
TCF4-250ENST00000625849 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
TCF4-250ENST00000625849 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
TCF4-250ENST00000625849 SIAH2O43255 324 aa11.08□□□□□ -0.64
TCF4-250ENST00000625849 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
TCF4-250ENST00000625849 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
TCF4-250ENST00000625849 MDM2Q00987 491 aaPredicted RBP11.06□□□□□ -0.64
TCF4-250ENST00000625849 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
TCF4-250ENST00000625849 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
TCF4-250ENST00000625849 GUCA2AQ02747 115 aa11.05□□□□□ -0.64
TCF4-250ENST00000625849 H3BM21 787 aa11.04□□□□□ -0.64
TCF4-250ENST00000625849 VEGFBP49765 207 aa11.04□□□□□ -0.64
TCF4-250ENST00000625849 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
TCF4-250ENST00000625849 RETREG3Q86VR2 466 aa11.03□□□□□ -0.64
TCF4-250ENST00000625849 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
TCF4-250ENST00000625849 IRF6O14896 467 aa11□□□□□ -0.65
TCF4-250ENST00000625849 SH3BP2P78314 561 aa11□□□□□ -0.65
TCF4-250ENST00000625849 ERBB4Q15303 1308 aa11□□□□□ -0.65
TCF4-250ENST00000625849 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
TCF4-250ENST00000625849 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
TCF4-250ENST00000625849 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
TCF4-250ENST00000625849 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
TCF4-250ENST00000625849 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
TCF4-250ENST00000625849 MS4A1P11836 297 aa10.95□□□□□ -0.66
TCF4-250ENST00000625849 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
TCF4-250ENST00000625849 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
TCF4-250ENST00000625849 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
TCF4-250ENST00000625849 FDX1P10109 184 aa10.94□□□□□ -0.66
TCF4-250ENST00000625849 CLCN1P35523 988 aa10.94□□□□□ -0.66
TCF4-250ENST00000625849 LOC100996750A0A140TA64 210 aa10.93□□□□□ -0.66
TCF4-250ENST00000625849 PLEKHG3A1L390 1219 aa10.93□□□□□ -0.66
TCF4-250ENST00000625849 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
TCF4-250ENST00000625849 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
TCF4-250ENST00000625849 KRTAP4-6Q9BYQ5 205 aa10.93□□□□□ -0.66
TCF4-250ENST00000625849 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
TCF4-250ENST00000625849 PTPRNQ16849 979 aa10.92□□□□□ -0.66
TCF4-250ENST00000625849 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
TCF4-250ENST00000625849 NNTQ13423 1086 aa10.91□□□□□ -0.66
TCF4-250ENST00000625849 SCARF1Q14162 830 aa10.91□□□□□ -0.66
TCF4-250ENST00000625849 BAP1Q92560 729 aa10.91□□□□□ -0.66
TCF4-250ENST00000625849 PCDHGC3Q9UN70 934 aa10.91□□□□□ -0.66
TCF4-250ENST00000625849 VARSP26640 1264 aaKnown RBP10.9□□□□□ -0.66
TCF4-250ENST00000625849 EVA1BQ9NVM1 165 aa10.9□□□□□ -0.66
TCF4-250ENST00000625849 MPNDQ8N594 471 aa10.89□□□□□ -0.67
TCF4-250ENST00000625849 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
TCF4-250ENST00000625849 ZNF511Q8NB15 262 aa10.88□□□□□ -0.67
TCF4-250ENST00000625849 PURBQ96QR8 312 aaKnown RBP10.88□□□□□ -0.67
TCF4-250ENST00000625849 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
TCF4-250ENST00000625849 ADH1CP00326 375 aa10.87□□□□□ -0.67
TCF4-250ENST00000625849 VSIG8P0DPA2 414 aa10.87□□□□□ -0.67
TCF4-250ENST00000625849 TIMP2P16035 220 aa10.87□□□□□ -0.67
TCF4-250ENST00000625849 WDR4P57081 412 aaKnown RBP10.87□□□□□ -0.67
TCF4-250ENST00000625849 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
TCF4-250ENST00000625849 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms