RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
CCNA1-203ENST00000625767 SIRT1Q96EB6 747 aa23.32■■□□□ 1.32
CCNA1-203ENST00000625767 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
CCNA1-203ENST00000625767 TULP4Q9NRJ4 1543 aa23.31■■□□□ 1.32
CCNA1-203ENST00000625767 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
CCNA1-203ENST00000625767 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
CCNA1-203ENST00000625767 LRRC7Q96NW7 1537 aa23.29■■□□□ 1.32
CCNA1-203ENST00000625767 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
CCNA1-203ENST00000625767 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
CCNA1-203ENST00000625767 ADGRB2O60241 1585 aa23.26■■□□□ 1.31
CCNA1-203ENST00000625767 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
CCNA1-203ENST00000625767 ADGRL3Q9HAR2 1447 aa23.23■■□□□ 1.31
CCNA1-203ENST00000625767 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
CCNA1-203ENST00000625767 TMF1P82094 1093 aa23.22■■□□□ 1.31
CCNA1-203ENST00000625767 C14orf37Q86TY3 774 aa23.22■■□□□ 1.31
CCNA1-203ENST00000625767 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
CCNA1-203ENST00000625767 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
CCNA1-203ENST00000625767 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
CCNA1-203ENST00000625767 CABP2Q9NPB3 220 aa23.21■■□□□ 1.31
CCNA1-203ENST00000625767 NUTM2FA1L443 756 aa23.2■■□□□ 1.3
CCNA1-203ENST00000625767 CDK19Q9BWU1 502 aa23.2■■□□□ 1.3
CCNA1-203ENST00000625767 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
CCNA1-203ENST00000625767 CDC42BPGQ6DT37 1551 aa23.19■■□□□ 1.3
CCNA1-203ENST00000625767 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
CCNA1-203ENST00000625767 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
CCNA1-203ENST00000625767 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
CCNA1-203ENST00000625767 CCDC7Q96M83 1385 aa23.18■■□□□ 1.3
CCNA1-203ENST00000625767 MYOM1P52179 1685 aa23.18■■□□□ 1.3
CCNA1-203ENST00000625767 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
CCNA1-203ENST00000625767 PRR36Q9H6K5 1346 aa23.15■■□□□ 1.3
CCNA1-203ENST00000625767 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.3
CCNA1-203ENST00000625767 ATP7BP35670 1465 aa23.13■■□□□ 1.29
CCNA1-203ENST00000625767 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
CCNA1-203ENST00000625767 MSH6P52701 1360 aa23.12■■□□□ 1.29
CCNA1-203ENST00000625767 TOPAZ1Q8N9V7 1692 aa23.11■■□□□ 1.29
CCNA1-203ENST00000625767 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
CCNA1-203ENST00000625767 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
CCNA1-203ENST00000625767 DCCP43146 1447 aa23.07■■□□□ 1.28
CCNA1-203ENST00000625767 MST1RQ04912 1400 aa23.07■■□□□ 1.28
CCNA1-203ENST00000625767 ITSN1Q15811 1721 aa23.06■■□□□ 1.28
CCNA1-203ENST00000625767 ATF3P18847 181 aa23.06■■□□□ 1.28
CCNA1-203ENST00000625767 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
CCNA1-203ENST00000625767 SLC12A5Q9H2X9 1139 aa23.06■■□□□ 1.28
CCNA1-203ENST00000625767 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
CCNA1-203ENST00000625767 TMC1Q8TDI8 760 aa23.05■■□□□ 1.28
CCNA1-203ENST00000625767 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
CCNA1-203ENST00000625767 ATAD2Q6PL18 1390 aa23.05■■□□□ 1.28
CCNA1-203ENST00000625767 C1orf167Q5SNV9 1468 aa23.04■■□□□ 1.28
CCNA1-203ENST00000625767 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
CCNA1-203ENST00000625767 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
CCNA1-203ENST00000625767 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
CCNA1-203ENST00000625767 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
CCNA1-203ENST00000625767 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
CCNA1-203ENST00000625767 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
CCNA1-203ENST00000625767 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
CCNA1-203ENST00000625767 CCDC61Q9Y6R9 512 aa23.01■■□□□ 1.27
CCNA1-203ENST00000625767 ESCO1Q5FWF5 840 aa22.99■■□□□ 1.27
CCNA1-203ENST00000625767 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
CCNA1-203ENST00000625767 CERKQ8TCT0 537 aa22.98■■□□□ 1.27
CCNA1-203ENST00000625767 PANK3Q9H999 370 aa22.97■■□□□ 1.27
CCNA1-203ENST00000625767 SLAIN2Q9P270 581 aa22.97■■□□□ 1.27
CCNA1-203ENST00000625767 A0A1W2PP64 1363 aa22.96■■□□□ 1.27
CCNA1-203ENST00000625767 ACEP12821 1306 aa22.95■■□□□ 1.26
CCNA1-203ENST00000625767 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
CCNA1-203ENST00000625767 MON2Q7Z3U7 1717 aa22.94■■□□□ 1.26
CCNA1-203ENST00000625767 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
CCNA1-203ENST00000625767 DDX17Q92841 729 aaKnown RBP22.93■■□□□ 1.26
CCNA1-203ENST00000625767 CARD14Q9BXL6 1004 aa22.93■■□□□ 1.26
CCNA1-203ENST00000625767 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
CCNA1-203ENST00000625767 NINLQ9Y2I6 1382 aa22.93■■□□□ 1.26
CCNA1-203ENST00000625767 CPSF1Q10570 1443 aaKnown RBP22.92■■□□□ 1.26
CCNA1-203ENST00000625767 KIF1AQ12756 1690 aa22.92■■□□□ 1.26
CCNA1-203ENST00000625767 BRINP3Q76B58 766 aa22.92■■□□□ 1.26
CCNA1-203ENST00000625767 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
CCNA1-203ENST00000625767 ROBO1Q9Y6N7 1651 aa22.92■■□□□ 1.26
CCNA1-203ENST00000625767 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
CCNA1-203ENST00000625767 NGDNQ8NEJ9 315 aaKnown RBP22.9■■□□□ 1.26
CCNA1-203ENST00000625767 NRKQ7Z2Y5 1582 aa22.9■■□□□ 1.26
CCNA1-203ENST00000625767 FOXO3O43524 673 aa22.9■■□□□ 1.26
CCNA1-203ENST00000625767 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.25
CCNA1-203ENST00000625767 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
CCNA1-203ENST00000625767 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
CCNA1-203ENST00000625767 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
CCNA1-203ENST00000625767 PER1O15534 1290 aaPredicted RBP22.87■■□□□ 1.25
CCNA1-203ENST00000625767 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
CCNA1-203ENST00000625767 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
CCNA1-203ENST00000625767 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
CCNA1-203ENST00000625767 USP6P35125 1406 aa22.86■■□□□ 1.25
CCNA1-203ENST00000625767 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
CCNA1-203ENST00000625767 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
CCNA1-203ENST00000625767 TOM1O60784 492 aa22.84■■□□□ 1.25
CCNA1-203ENST00000625767 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
CCNA1-203ENST00000625767 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
CCNA1-203ENST00000625767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.83■■□□□ 1.24
CCNA1-203ENST00000625767 SSH2Q76I76 1423 aa22.82■■□□□ 1.24
CCNA1-203ENST00000625767 KIF20BQ96Q89 1820 aa22.82■■□□□ 1.24
CCNA1-203ENST00000625767 PSME1Q06323 249 aa22.81■■□□□ 1.24
CCNA1-203ENST00000625767 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
CCNA1-203ENST00000625767 PXDNQ92626 1479 aa22.81■■□□□ 1.24
CCNA1-203ENST00000625767 EDC4Q6P2E9 1401 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms