RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EID1Q9Y6B2 187 aa10.65□□□□□ -0.7
NPLOC4-221ENST00000625705 KDM5AP29375 1690 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-221ENST00000625705 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-221ENST00000625705 TRIM26Q12899 539 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-221ENST00000625705 BCANQ96GW7 911 aa10.64□□□□□ -0.71
NPLOC4-221ENST00000625705 MPHOSPH9Q99550 1183 aa10.64□□□□□ -0.71
NPLOC4-221ENST00000625705 TRPM2O94759 1503 aa10.63□□□□□ -0.71
NPLOC4-221ENST00000625705 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
NPLOC4-221ENST00000625705 SCAF11Q99590 1463 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-221ENST00000625705 PTPRTO14522 1441 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 PLCG2P16885 1265 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 KIF1BO60333 1816 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 IQGAP1P46940 1657 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
NPLOC4-221ENST00000625705 NPHP4O75161 1426 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-221ENST00000625705 HDGFP51858 240 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-221ENST00000625705 TMEM2Q9UHN6 1383 aa10.61□□□□□ -0.71
NPLOC4-221ENST00000625705 NEURL4Q96JN8 1562 aa10.6□□□□□ -0.71
NPLOC4-221ENST00000625705 CCDC144AA2RUR9 1427 aa10.6□□□□□ -0.71
NPLOC4-221ENST00000625705 SLIT1O75093 1534 aa10.6□□□□□ -0.71
NPLOC4-221ENST00000625705 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-221ENST00000625705 ARHGAP23Q9P227 1491 aa10.59□□□□□ -0.71
NPLOC4-221ENST00000625705 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
NPLOC4-221ENST00000625705 PSEN1P49768 467 aa10.58□□□□□ -0.72
NPLOC4-221ENST00000625705 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
NPLOC4-221ENST00000625705 HRCP23327 699 aa10.57□□□□□ -0.72
NPLOC4-221ENST00000625705 NUTM2DQ5VT03 806 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-221ENST00000625705 MED14O60244 1454 aa10.56□□□□□ -0.72
NPLOC4-221ENST00000625705 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
NPLOC4-221ENST00000625705 LTKP29376 864 aa10.55□□□□□ -0.72
NPLOC4-221ENST00000625705 ZNF335Q9H4Z2 1342 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-221ENST00000625705 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
NPLOC4-221ENST00000625705 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
NPLOC4-221ENST00000625705 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
NPLOC4-221ENST00000625705 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-221ENST00000625705 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-221ENST00000625705 SLC26A8Q96RN1 970 aa10.53□□□□□ -0.72
NPLOC4-221ENST00000625705 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.72
NPLOC4-221ENST00000625705 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-221ENST00000625705 NEXMIFQ5QGS0 1516 aa10.52□□□□□ -0.73
NPLOC4-221ENST00000625705 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
NPLOC4-221ENST00000625705 CPS1P31327 1500 aa10.51□□□□□ -0.73
NPLOC4-221ENST00000625705 PPLO60437 1756 aa10.5□□□□□ -0.73
NPLOC4-221ENST00000625705 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-221ENST00000625705 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
NPLOC4-221ENST00000625705 DIP2AQ14689 1571 aa10.5□□□□□ -0.73
NPLOC4-221ENST00000625705 RPGRIP1LQ68CZ1 1315 aa10.5□□□□□ -0.73
NPLOC4-221ENST00000625705 POTEMA6NI47 508 aa10.49□□□□□ -0.73
NPLOC4-221ENST00000625705 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
NPLOC4-221ENST00000625705 ANKRD30BQ9BXX2 1392 aa10.49□□□□□ -0.73
NPLOC4-221ENST00000625705 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
NPLOC4-221ENST00000625705 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
NPLOC4-221ENST00000625705 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
NPLOC4-221ENST00000625705 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-221ENST00000625705 SPATA31E1Q6ZUB1 1445 aa10.47□□□□□ -0.73
NPLOC4-221ENST00000625705 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
NPLOC4-221ENST00000625705 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-221ENST00000625705 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
NPLOC4-221ENST00000625705 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
NPLOC4-221ENST00000625705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.732e-7■■■□□ 15.4
NPLOC4-221ENST00000625705 STRCP1A6NGW2 1772 aa10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 NKTRP30414 1462 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 DHX57Q6P158 1386 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 KDM2AQ9Y2K7 1162 aa10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
NPLOC4-221ENST00000625705 NRXN3Q9Y4C0 1643 aa10.44□□□□□ -0.74
NPLOC4-221ENST00000625705 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
NPLOC4-221ENST00000625705 IQSEC2Q5JU85 1478 aa10.44□□□□□ -0.74
NPLOC4-221ENST00000625705 KCNA6P17658 529 aa10.44□□□□□ -0.74
NPLOC4-221ENST00000625705 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
NPLOC4-221ENST00000625705 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 CHD2O14647 1828 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 DCAF11Q8TEB1 546 aa10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 LAMC1P11047 1609 aa10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 ALKQ9UM73 1620 aa10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 LRRC7Q96NW7 1537 aa10.43□□□□□ -0.74
NPLOC4-221ENST00000625705 MYOM2P54296 1465 aa10.42□□□□□ -0.74
NPLOC4-221ENST00000625705 ADGRF5Q8IZF2 1346 aa10.42□□□□□ -0.74
NPLOC4-221ENST00000625705 UBAP1LF5GYI3 381 aa10.42□□□□□ -0.74
NPLOC4-221ENST00000625705 FBXO41Q8TF61 875 aa10.42□□□□□ -0.74
NPLOC4-221ENST00000625705 AMOTL2Q9Y2J4 779 aa10.41□□□□□ -0.74
NPLOC4-221ENST00000625705 PIK3C2GO75747 1445 aa10.41□□□□□ -0.74
NPLOC4-221ENST00000625705 METP08581 1390 aa10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 MSH6P52701 1360 aa10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 TMEM94Q12767 1356 aa10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 TOM1O60784 492 aa10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 RBM33Q96EV2 1170 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 XRN1Q8IZH2 1706 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-221ENST00000625705 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 PIP4K2BP78356 416 aa10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms