RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
PCDHB16-202ENST00000625044 TRAK1Q9UPV9 953 aa29.09■■■□□ 2.25
PCDHB16-202ENST00000625044 PHLPP1O60346 1717 aa29.08■■■□□ 2.25
PCDHB16-202ENST00000625044 AHDC1Q5TGY3 1603 aaPredicted RBP29.08■■■□□ 2.25
PCDHB16-202ENST00000625044 KIAA1210Q9ULL0 1709 aa29.06■■■□□ 2.24
PCDHB16-202ENST00000625044 SAFB2Q14151 953 aaKnown RBP eCLIP29.05■■■□□ 2.24
PCDHB16-202ENST00000625044 POGKQ9P215 609 aa29.05■■■□□ 2.24
PCDHB16-202ENST00000625044 COL16A1Q07092 1604 aaPredicted RBP29.05■■■□□ 2.24
PCDHB16-202ENST00000625044 DISP3Q9P2K9 1392 aa29.03■■■□□ 2.24
PCDHB16-202ENST00000625044 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
PCDHB16-202ENST00000625044 ORAI2Q96SN7 254 aa29.03■■■□□ 2.24
PCDHB16-202ENST00000625044 MED1Q15648 1581 aaPredicted RBP29.01■■■□□ 2.24
PCDHB16-202ENST00000625044 NUTM2FA1L443 756 aa28.99■■■□□ 2.23
PCDHB16-202ENST00000625044 DDX17Q92841 729 aaKnown RBP28.99■■■□□ 2.23
PCDHB16-202ENST00000625044 NHSL1Q5SYE7 1610 aa28.98■■■□□ 2.23
PCDHB16-202ENST00000625044 JCADQ9P266 1359 aa28.98■■■□□ 2.23
PCDHB16-202ENST00000625044 FMN2Q9NZ56 1722 aa28.97■■■□□ 2.23
PCDHB16-202ENST00000625044 ESCO1Q5FWF5 840 aa28.96■■■□□ 2.23
PCDHB16-202ENST00000625044 ARHGEF28Q8N1W1 1705 aaKnown RBP28.95■■■□□ 2.23
PCDHB16-202ENST00000625044 ADGRB2O60241 1585 aa28.94■■■□□ 2.22
PCDHB16-202ENST00000625044 MINK1Q8N4C8 1332 aaPredicted RBP28.94■■■□□ 2.22
PCDHB16-202ENST00000625044 TONSLQ96HA7 1378 aa28.93■■■□□ 2.22
PCDHB16-202ENST00000625044 HIRIP3Q9BW71 556 aaPredicted RBP28.93■■■□□ 2.22
PCDHB16-202ENST00000625044 TRPM1Q7Z4N2 1603 aa28.91■■■□□ 2.22
PCDHB16-202ENST00000625044 NBPF8Q3BBV2 869 aa28.9■■■□□ 2.22
PCDHB16-202ENST00000625044 SOS2Q07890 1332 aaPredicted RBP28.89■■■□□ 2.21
PCDHB16-202ENST00000625044 LRRC59Q96AG4 307 aaKnown RBP28.88■■■□□ 2.21
PCDHB16-202ENST00000625044 FOXO3O43524 673 aa28.86■■■□□ 2.21
PCDHB16-202ENST00000625044 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
PCDHB16-202ENST00000625044 WASLO00401 505 aaPredicted RBP28.85■■■□□ 2.21
PCDHB16-202ENST00000625044 NPHP3Q7Z494 1330 aa28.85■■■□□ 2.21
PCDHB16-202ENST00000625044 ROCK2O75116 1388 aaKnown RBP28.85■■■□□ 2.21
PCDHB16-202ENST00000625044 ANKARQ7Z5J8 1434 aa28.85■■■□□ 2.21
PCDHB16-202ENST00000625044 SPATA31A6Q5VVP1 1343 aa28.84■■■□□ 2.21
PCDHB16-202ENST00000625044 USP32Q8NFA0 1604 aa28.83■■■□□ 2.21
PCDHB16-202ENST00000625044 RGPD8O14715 1765 aaPredicted RBP28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 PXDNQ92626 1479 aa28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 EIF3AQ14152 1382 aaKnown RBP28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 PNPLA6Q8IY17 1366 aa28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 PHF23Q9BUL5 403 aaPredicted RBP28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 PHF8Q9UPP1 1060 aa28.81■■■□□ 2.2
PCDHB16-202ENST00000625044 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
PCDHB16-202ENST00000625044 TULP4Q9NRJ4 1543 aa28.8■■■□□ 2.2
PCDHB16-202ENST00000625044 PRR36Q9H6K5 1346 aa28.8■■■□□ 2.2
PCDHB16-202ENST00000625044 CENPJQ9HC77 1338 aaPredicted RBP28.8■■■□□ 2.2
PCDHB16-202ENST00000625044 XPCQ01831 940 aaPredicted RBP28.8■■■□□ 2.2
PCDHB16-202ENST00000625044 GPRASP1Q5JY77 1395 aa28.79■■■□□ 2.2
PCDHB16-202ENST00000625044 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
PCDHB16-202ENST00000625044 LRP6O75581 1613 aa28.79■■■□□ 2.2
PCDHB16-202ENST00000625044 ILDR2Q71H61 639 aa28.76■■■□□ 2.19
PCDHB16-202ENST00000625044 RALGAPBQ86X10 1494 aa28.75■■■□□ 2.19
PCDHB16-202ENST00000625044 CDK19Q9BWU1 502 aa28.75■■■□□ 2.19
PCDHB16-202ENST00000625044 NUTM2BA6NNL0 878 aaPredicted RBP28.74■■■□□ 2.19
PCDHB16-202ENST00000625044 NUTM2EB1AL46 878 aaPredicted RBP28.74■■■□□ 2.19
PCDHB16-202ENST00000625044 NUTM2AQ8IVF1 878 aaPredicted RBP28.74■■■□□ 2.19
PCDHB16-202ENST00000625044 PMFBP1Q8TBY8 1022 aa28.74■■■□□ 2.19
PCDHB16-202ENST00000625044 RGS17Q9UGC6 210 aaPredicted RBP28.73■■■□□ 2.19
PCDHB16-202ENST00000625044 ATP7BP35670 1465 aa28.72■■■□□ 2.19
PCDHB16-202ENST00000625044 KRT28Q7Z3Y7 464 aa28.72■■■□□ 2.19
PCDHB16-202ENST00000625044 QRICH2Q9H0J4 1663 aa28.71■■■□□ 2.19
PCDHB16-202ENST00000625044 NUDT16Q96DE0 195 aaKnown RBP28.71■■■□□ 2.19
PCDHB16-202ENST00000625044 CARD11Q9BXL7 1154 aa28.7■■■□□ 2.18
PCDHB16-202ENST00000625044 MEX3CQ5U5Q3 659 aaKnown RBP28.68■■■□□ 2.18
PCDHB16-202ENST00000625044 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
PCDHB16-202ENST00000625044 SPATA31A3Q5VYP0 1347 aa28.68■■■□□ 2.18
PCDHB16-202ENST00000625044 PSME1Q06323 249 aa28.67■■■□□ 2.18
PCDHB16-202ENST00000625044 COL22A1Q8NFW1 1626 aaPredicted RBP28.65■■■□□ 2.18
PCDHB16-202ENST00000625044 TIMELESSQ9UNS1 1208 aa28.65■■■□□ 2.18
PCDHB16-202ENST00000625044 CCDC61Q9Y6R9 512 aa28.64■■■□□ 2.18
PCDHB16-202ENST00000625044 SBNO1A3KN83 1393 aa28.63■■■□□ 2.17
PCDHB16-202ENST00000625044 SRPK2P78362 688 aaKnown RBP28.63■■■□□ 2.17
PCDHB16-202ENST00000625044 ITSN1Q15811 1721 aa28.63■■■□□ 2.17
PCDHB16-202ENST00000625044 TNS3Q68CZ2 1445 aa28.62■■■□□ 2.17
PCDHB16-202ENST00000625044 NGDNQ8NEJ9 315 aaKnown RBP28.62■■■□□ 2.17
PCDHB16-202ENST00000625044 CABP2Q9NPB3 220 aa28.62■■■□□ 2.17
PCDHB16-202ENST00000625044 TOPAZ1Q8N9V7 1692 aa28.61■■■□□ 2.17
PCDHB16-202ENST00000625044 EVC2Q86UK5 1308 aa28.6■■■□□ 2.17
PCDHB16-202ENST00000625044 ADAMTS2O95450 1211 aa28.59■■■□□ 2.17
PCDHB16-202ENST00000625044 PLEKHG3A1L390 1219 aa28.58■■■□□ 2.17
PCDHB16-202ENST00000625044 POTEAQ6S8J7 498 aa28.58■■■□□ 2.17
PCDHB16-202ENST00000625044 POLR3AO14802 1390 aaPredicted RBP28.57■■■□□ 2.16
PCDHB16-202ENST00000625044 SBNO2Q9Y2G9 1366 aa28.57■■■□□ 2.16
PCDHB16-202ENST00000625044 TRPM3Q9HCF6 1732 aaPredicted RBP28.57■■■□□ 2.16
PCDHB16-202ENST00000625044 C8orf37Q96NL8 207 aa28.56■■■□□ 2.16
PCDHB16-202ENST00000625044 ARHGEF10O15013 1369 aa28.55■■■□□ 2.16
PCDHB16-202ENST00000625044 ACEP12821 1306 aa28.55■■■□□ 2.16
PCDHB16-202ENST00000625044 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
PCDHB16-202ENST00000625044 LMOD2Q6P5Q4 547 aa28.54■■■□□ 2.16
PCDHB16-202ENST00000625044 AFF2P51816 1311 aa28.53■■■□□ 2.16
PCDHB16-202ENST00000625044 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
PCDHB16-202ENST00000625044 CABP1Q9NZU7 370 aa28.51■■■□□ 2.15
PCDHB16-202ENST00000625044 NGLY1Q96IV0 654 aa28.5■■■□□ 2.15
PCDHB16-202ENST00000625044 ALS2Q96Q42 1657 aa28.49■■■□□ 2.15
PCDHB16-202ENST00000625044 CABLES1Q8TDN4 633 aa28.49■■■□□ 2.15
PCDHB16-202ENST00000625044 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
PCDHB16-202ENST00000625044 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
PCDHB16-202ENST00000625044 PLEKHG5O94827 1062 aa28.47■■■□□ 2.15
PCDHB16-202ENST00000625044 TESK2Q96S53 571 aa28.46■■■□□ 2.15
PCDHB16-202ENST00000625044 ATAD2Q6PL18 1390 aa28.45■■■□□ 2.14
PCDHB16-202ENST00000625044 FNBP4Q8N3X1 1017 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms