RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
PCDHB5-202ENST00000623915 CDC42BPGQ6DT37 1551 aa26.99■■□□□ 1.91
PCDHB5-202ENST00000623915 ADGRF5Q8IZF2 1346 aa26.96■■□□□ 1.91
PCDHB5-202ENST00000623915 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
PCDHB5-202ENST00000623915 TECPR2O15040 1411 aa26.95■■□□□ 1.9
PCDHB5-202ENST00000623915 RGS12O14924 1447 aa26.94■■□□□ 1.9
PCDHB5-202ENST00000623915 COL22A1Q8NFW1 1626 aaPredicted RBP26.94■■□□□ 1.9
PCDHB5-202ENST00000623915 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
PCDHB5-202ENST00000623915 PIK3C2GO75747 1445 aa26.9■■□□□ 1.9
PCDHB5-202ENST00000623915 PXDNQ92626 1479 aa26.89■■□□□ 1.9
PCDHB5-202ENST00000623915 MYOM2P54296 1465 aa26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 NRXN1Q9ULB1 1477 aa26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 LRPPRCP42704 1394 aaKnown RBP26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 ADAMTS2O95450 1211 aa26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 STAC3Q96MF2 364 aa26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 QTRT2Q9H974 415 aaKnown RBP26.88■■□□□ 1.89
PCDHB5-202ENST00000623915 RGL3Q3MIN7 710 aa26.87■■□□□ 1.89
PCDHB5-202ENST00000623915 RBM6P78332 1123 aaKnown RBP26.86■■□□□ 1.89
PCDHB5-202ENST00000623915 DHX57Q6P158 1386 aaKnown RBP26.84■■□□□ 1.89
PCDHB5-202ENST00000623915 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
PCDHB5-202ENST00000623915 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
PCDHB5-202ENST00000623915 WAPLQ7Z5K2 1190 aa26.84■■□□□ 1.89
PCDHB5-202ENST00000623915 NGLY1Q96IV0 654 aa26.84■■□□□ 1.89
PCDHB5-202ENST00000623915 NPHP3Q7Z494 1330 aa26.83■■□□□ 1.89
PCDHB5-202ENST00000623915 ESCO1Q5FWF5 840 aa26.82■■□□□ 1.88
PCDHB5-202ENST00000623915 STK26Q9P289 416 aa26.82■■□□□ 1.88
PCDHB5-202ENST00000623915 FMN2Q9NZ56 1722 aa26.82■■□□□ 1.88
PCDHB5-202ENST00000623915 TMEM132EQ6IEE7 984 aa26.81■■□□□ 1.88
PCDHB5-202ENST00000623915 YTHDC2Q9H6S0 1430 aaKnown RBP26.8■■□□□ 1.88
PCDHB5-202ENST00000623915 FNBP4Q8N3X1 1017 aaPredicted RBP26.79■■□□□ 1.88
PCDHB5-202ENST00000623915 ATRNO75882 1429 aa26.78■■□□□ 1.88
PCDHB5-202ENST00000623915 MARF1Q9Y4F3 1742 aaKnown RBP26.78■■□□□ 1.88
PCDHB5-202ENST00000623915 FOXO3O43524 673 aa26.77■■□□□ 1.88
PCDHB5-202ENST00000623915 XPCQ01831 940 aaPredicted RBP26.77■■□□□ 1.88
PCDHB5-202ENST00000623915 USP21Q9UK80 565 aa26.77■■□□□ 1.88
PCDHB5-202ENST00000623915 NUTM2FA1L443 756 aa26.75■■□□□ 1.87
PCDHB5-202ENST00000623915 KIF1AQ12756 1690 aa26.74■■□□□ 1.87
PCDHB5-202ENST00000623915 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
PCDHB5-202ENST00000623915 TRPC5Q9UL62 973 aaPredicted RBP26.73■■□□□ 1.87
PCDHB5-202ENST00000623915 C14orf93Q9H972 538 aaKnown RBP26.72■■□□□ 1.87
PCDHB5-202ENST00000623915 EP400Q96L91 3159 aa26.72■■□□□ 1.87
PCDHB5-202ENST00000623915 SIRT1Q96EB6 747 aa26.7■■□□□ 1.86
PCDHB5-202ENST00000623915 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
PCDHB5-202ENST00000623915 CFAP70Q5T0N1 1121 aa26.67■■□□□ 1.86
PCDHB5-202ENST00000623915 ATAD2Q6PL18 1390 aa26.67■■□□□ 1.86
PCDHB5-202ENST00000623915 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.67■■□□□ 1.86
PCDHB5-202ENST00000623915 SPATA31A3Q5VYP0 1347 aa26.66■■□□□ 1.86
PCDHB5-202ENST00000623915 KIAA1210Q9ULL0 1709 aa26.66■■□□□ 1.86
PCDHB5-202ENST00000623915 USP32Q8NFA0 1604 aa26.64■■□□□ 1.85
PCDHB5-202ENST00000623915 SLIT2O94813 1529 aa26.63■■□□□ 1.85
PCDHB5-202ENST00000623915 DLC1Q96QB1 1528 aa26.63■■□□□ 1.85
PCDHB5-202ENST00000623915 SRCAPQ6ZRS2 3230 aa26.63■■□□□ 1.85
PCDHB5-202ENST00000623915 ADGRB1O14514 1584 aa26.63■■□□□ 1.85
PCDHB5-202ENST00000623915 DCAF11Q8TEB1 546 aa26.61■■□□□ 1.85
PCDHB5-202ENST00000623915 CLSPNQ9HAW4 1339 aa26.61■■□□□ 1.85
PCDHB5-202ENST00000623915 ADGRB2O60241 1585 aa26.6■■□□□ 1.85
PCDHB5-202ENST00000623915 GLI3P10071 1580 aa26.6■■□□□ 1.85
PCDHB5-202ENST00000623915 TNS3Q68CZ2 1445 aa26.6■■□□□ 1.85
PCDHB5-202ENST00000623915 KRT28Q7Z3Y7 464 aa26.6■■□□□ 1.85
PCDHB5-202ENST00000623915 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
PCDHB5-202ENST00000623915 PRAM1Q96QH2 718 aa26.59■■□□□ 1.85
PCDHB5-202ENST00000623915 ABCA3Q99758 1704 aa26.59■■□□□ 1.85
PCDHB5-202ENST00000623915 PHF8Q9UPP1 1060 aa26.58■■□□□ 1.85
PCDHB5-202ENST00000623915 GJD4Q96KN9 370 aaPredicted RBP26.57■■□□□ 1.84
PCDHB5-202ENST00000623915 RALGAPBQ86X10 1494 aa26.56■■□□□ 1.84
PCDHB5-202ENST00000623915 SAFB2Q14151 953 aaKnown RBP eCLIP26.56■■□□□ 1.84
PCDHB5-202ENST00000623915 ANKARQ7Z5J8 1434 aa26.55■■□□□ 1.84
PCDHB5-202ENST00000623915 UNC5CLQ8IV45 518 aa26.54■■□□□ 1.84
PCDHB5-202ENST00000623915 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
PCDHB5-202ENST00000623915 SBNO1A3KN83 1393 aa26.54■■□□□ 1.84
PCDHB5-202ENST00000623915 PLCH1Q4KWH8 1693 aa26.53■■□□□ 1.84
PCDHB5-202ENST00000623915 L3MBTL2Q969R5 705 aa26.51■■□□□ 1.83
PCDHB5-202ENST00000623915 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
PCDHB5-202ENST00000623915 CABLES1Q8TDN4 633 aa26.5■■□□□ 1.83
PCDHB5-202ENST00000623915 NWD2Q9ULI1 1742 aa26.5■■□□□ 1.83
PCDHB5-202ENST00000623915 PSME1Q06323 249 aa26.49■■□□□ 1.83
PCDHB5-202ENST00000623915 KDM2AQ9Y2K7 1162 aa26.49■■□□□ 1.83
PCDHB5-202ENST00000623915 POGKQ9P215 609 aa26.48■■□□□ 1.83
PCDHB5-202ENST00000623915 ARHGEF10O15013 1369 aa26.47■■□□□ 1.83
PCDHB5-202ENST00000623915 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
PCDHB5-202ENST00000623915 TULP4Q9NRJ4 1543 aa26.45■■□□□ 1.83
PCDHB5-202ENST00000623915 PRR36Q9H6K5 1346 aa26.45■■□□□ 1.83
PCDHB5-202ENST00000623915 ALS2Q96Q42 1657 aa26.45■■□□□ 1.82
PCDHB5-202ENST00000623915 PMFBP1Q8TBY8 1022 aa26.45■■□□□ 1.82
PCDHB5-202ENST00000623915 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
PCDHB5-202ENST00000623915 TRPM1Q7Z4N2 1603 aa26.44■■□□□ 1.82
PCDHB5-202ENST00000623915 HIRIP3Q9BW71 556 aaPredicted RBP26.44■■□□□ 1.82
PCDHB5-202ENST00000623915 HAP1P54257 671 aaPredicted RBP26.42■■□□□ 1.82
PCDHB5-202ENST00000623915 VPS72Q15906 364 aa26.42■■□□□ 1.82
PCDHB5-202ENST00000623915 CCDC125Q86Z20 511 aa26.42■■□□□ 1.82
PCDHB5-202ENST00000623915 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
PCDHB5-202ENST00000623915 ARHGEF28Q8N1W1 1705 aaKnown RBP26.42■■□□□ 1.82
PCDHB5-202ENST00000623915 PLEKHG5O94827 1062 aa26.41■■□□□ 1.82
PCDHB5-202ENST00000623915 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
PCDHB5-202ENST00000623915 TIMELESSQ9UNS1 1208 aa26.41■■□□□ 1.82
PCDHB5-202ENST00000623915 MINK1Q8N4C8 1332 aaPredicted RBP26.4■■□□□ 1.82
PCDHB5-202ENST00000623915 LMOD2Q6P5Q4 547 aa26.4■■□□□ 1.82
PCDHB5-202ENST00000623915 CRYBG1Q9Y4K1 1723 aa26.39■■□□□ 1.82
PCDHB5-202ENST00000623915 EIF3AQ14152 1382 aaKnown RBP26.39■■□□□ 1.82
PCDHB5-202ENST00000623915 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms