RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 ERC2O15083 957 aa10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 INTS3Q68E01 1043 aaKnown RBP10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 PRAM1Q96QH2 718 aa10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 PLEKHO1Q53GL0 409 aaPredicted RBP10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 DIAPH3Q9NSV4 1193 aa10.9□□□□□ -0.66
AP000542.3-201ENST00000623391 FANCAO15360 1455 aa10.9□□□□□ -0.67
AP000542.3-201ENST00000623391 CCDC30Q5VVM6 783 aa10.9□□□□□ -0.67
AP000542.3-201ENST00000623391 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 CDK19Q9BWU1 502 aa10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 MTHFSP49914 203 aa10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 SCAF11Q99590 1463 aaKnown RBP10.89□□□□□ -0.67
AP000542.3-201ENST00000623391 WDR62O43379 1518 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 IFIT2P09913 472 aaKnown RBP10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 GGNBP2Q9H3C7 697 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 GNAI3P08754 354 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 TPRNQ4KMQ1 711 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 PLCH2O75038 1416 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 DHX29Q7Z478 1369 aaKnown RBP10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 ZKSCAN1P17029 563 aaPredicted RBP10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.67
AP000542.3-201ENST00000623391 G3V3G9 751 aa10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 GCC1Q96CN9 775 aa10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
AP000542.3-201ENST00000623391 PLIN1O60240 522 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 FKBP5Q13451 457 aaPredicted RBP10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 NBPF1Q3BBV0 1214 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 ABCC11Q96J66 1382 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 TCP11L2Q8N4U5 519 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 NOL10Q9BSC4 688 aaKnown RBP10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 NLRP6P59044 892 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
AP000542.3-201ENST00000623391 HIP1O00291 1037 aa10.85□□□□□ -0.67
AP000542.3-201ENST00000623391 CDC45O75419 566 aa10.85□□□□□ -0.67
AP000542.3-201ENST00000623391 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
AP000542.3-201ENST00000623391 NUP153P49790 1475 aaKnown RBP10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 FCHSD2O94868 740 aa10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 RALGAPBQ86X10 1494 aa10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 H3BQV1 296 aa10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
AP000542.3-201ENST00000623391 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.67
AP000542.3-201ENST00000623391 ISY1Q9ULR0 285 aaKnown RBP10.83□□□□□ -0.67
AP000542.3-201ENST00000623391 FAM184AQ8NB25 1140 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 NSD3Q9BZ95 1437 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 UBTFL1P0CB47 393 aaPredicted RBP10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 CHMP5Q9NZZ3 219 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 WDR7Q9Y4E6 1490 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 NUCB2P80303 420 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 ABTB2Q8N961 1025 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 KDM5BQ9UGL1 1544 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 ATP10BO94823 1461 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 FRAT2O75474 233 aaPredicted RBP10.83□□□□□ -0.68
AP000542.3-201ENST00000623391 HMOX1P09601 288 aa10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 PRKAR2BP31323 418 aa10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
AP000542.3-201ENST00000623391 RIC3Q7Z5B4 369 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 SPG7Q9UQ90 795 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 KCNH5Q8NCM2 988 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 MCM2P49736 904 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 CNTROBQ8N137 903 aa10.81□□□□□ -0.68
AP000542.3-201ENST00000623391 ARHGEF12Q9NZN5 1544 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 PSMA5P28066 241 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 SF3A1Q15459 793 aaKnown RBP10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 TWISTNBQ3B726 338 aaPredicted RBP10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 TRIM29Q14134 588 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 RAPGEF3O95398 923 aa10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
AP000542.3-201ENST00000623391 NLRP2Q9NX02 1062 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms