RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
PCDHB9-202ENST00000623266 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
PCDHB9-202ENST00000623266 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
PCDHB9-202ENST00000623266 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
PCDHB9-202ENST00000623266 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
PCDHB9-202ENST00000623266 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
PCDHB9-202ENST00000623266 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
PCDHB9-202ENST00000623266 ANKRD30BQ9BXX2 1392 aa13.59□□□□□ -0.23
PCDHB9-202ENST00000623266 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
PCDHB9-202ENST00000623266 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
PCDHB9-202ENST00000623266 FOXO3O43524 673 aa13.59□□□□□ -0.23
PCDHB9-202ENST00000623266 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
PCDHB9-202ENST00000623266 RBM6P78332 1123 aaKnown RBP13.58□□□□□ -0.24
PCDHB9-202ENST00000623266 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
PCDHB9-202ENST00000623266 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
PCDHB9-202ENST00000623266 TECPR2O15040 1411 aa13.57□□□□□ -0.24
PCDHB9-202ENST00000623266 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-202ENST00000623266 FNBP4Q8N3X1 1017 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-202ENST00000623266 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-202ENST00000623266 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-202ENST00000623266 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
PCDHB9-202ENST00000623266 USP21Q9UK80 565 aa13.55□□□□□ -0.24
PCDHB9-202ENST00000623266 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-202ENST00000623266 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
PCDHB9-202ENST00000623266 PXDNQ92626 1479 aa13.54□□□□□ -0.24
PCDHB9-202ENST00000623266 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
PCDHB9-202ENST00000623266 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
PCDHB9-202ENST00000623266 RAB3GAP2Q9H2M9 1393 aa13.53□□□□□ -0.24
PCDHB9-202ENST00000623266 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
PCDHB9-202ENST00000623266 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
PCDHB9-202ENST00000623266 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
PCDHB9-202ENST00000623266 KNDC1Q76NI1 1749 aa13.52□□□□□ -0.25
PCDHB9-202ENST00000623266 RGS12O14924 1447 aa13.51□□□□□ -0.25
PCDHB9-202ENST00000623266 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 MYOM2P54296 1465 aa13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 DHX57Q6P158 1386 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
PCDHB9-202ENST00000623266 SAFB2Q14151 953 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHB9-202ENST00000623266 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
PCDHB9-202ENST00000623266 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
PCDHB9-202ENST00000623266 KDM2AQ9Y2K7 1162 aa13.48□□□□□ -0.25
PCDHB9-202ENST00000623266 ATRNO75882 1429 aa13.47□□□□□ -0.25
PCDHB9-202ENST00000623266 HRCP23327 699 aa13.46□□□□□ -0.25
PCDHB9-202ENST00000623266 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
PCDHB9-202ENST00000623266 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
PCDHB9-202ENST00000623266 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
PCDHB9-202ENST00000623266 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
PCDHB9-202ENST00000623266 TRAK1Q9UPV9 953 aa13.45□□□□□ -0.26
PCDHB9-202ENST00000623266 POGKQ9P215 609 aa13.44□□□□□ -0.26
PCDHB9-202ENST00000623266 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 ADGRB1O14514 1584 aa13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 PSME1Q06323 249 aa13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 UNC5CLQ8IV45 518 aa13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 HIRIP3Q9BW71 556 aaPredicted RBP13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 SLIT2O94813 1529 aa13.43□□□□□ -0.26
PCDHB9-202ENST00000623266 EP400Q96L91 3159 aa13.42□□□□□ -0.26
PCDHB9-202ENST00000623266 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
PCDHB9-202ENST00000623266 PRR36Q9H6K5 1346 aa13.41□□□□□ -0.26
PCDHB9-202ENST00000623266 DLC1Q96QB1 1528 aa13.41□□□□□ -0.26
PCDHB9-202ENST00000623266 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
PCDHB9-202ENST00000623266 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
PCDHB9-202ENST00000623266 MINK1Q8N4C8 1332 aaPredicted RBP13.4□□□□□ -0.26
PCDHB9-202ENST00000623266 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
PCDHB9-202ENST00000623266 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
PCDHB9-202ENST00000623266 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 ONECUT3O60422 494 aaPredicted RBP13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 GLI3P10071 1580 aa13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
PCDHB9-202ENST00000623266 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
PCDHB9-202ENST00000623266 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
PCDHB9-202ENST00000623266 VPS72Q15906 364 aa13.37□□□□□ -0.27
PCDHB9-202ENST00000623266 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
PCDHB9-202ENST00000623266 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
PCDHB9-202ENST00000623266 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
PCDHB9-202ENST00000623266 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
PCDHB9-202ENST00000623266 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
PCDHB9-202ENST00000623266 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
PCDHB9-202ENST00000623266 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
PCDHB9-202ENST00000623266 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
PCDHB9-202ENST00000623266 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
PCDHB9-202ENST00000623266 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
PCDHB9-202ENST00000623266 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
PCDHB9-202ENST00000623266 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
PCDHB9-202ENST00000623266 CDK19Q9BWU1 502 aa13.33□□□□□ -0.28
PCDHB9-202ENST00000623266 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.28
PCDHB9-202ENST00000623266 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
PCDHB9-202ENST00000623266 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
PCDHB9-202ENST00000623266 BTG4Q9NY30 223 aa13.32□□□□□ -0.28
PCDHB9-202ENST00000623266 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
PCDHB9-202ENST00000623266 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
PCDHB9-202ENST00000623266 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
PCDHB9-202ENST00000623266 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
PCDHB9-202ENST00000623266 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
PCDHB9-202ENST00000623266 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms