RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
MSH6-215ENST00000622629 WDR63Q8IWG1 891 aa16.02■□□□□ 0.15
MSH6-215ENST00000622629 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.15
MSH6-215ENST00000622629 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
MSH6-215ENST00000622629 KCNJ4P48050 445 aa16.01■□□□□ 0.15
MSH6-215ENST00000622629 PLCH2O75038 1416 aa16.01■□□□□ 0.15
MSH6-215ENST00000622629 NOB1Q9ULX3 412 aaKnown RBP16.01■□□□□ 0.15
MSH6-215ENST00000622629 A0A0G2JS52 829 aa16■□□□□ 0.15
MSH6-215ENST00000622629 EID1Q9Y6B2 187 aa16■□□□□ 0.15
MSH6-215ENST00000622629 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
MSH6-215ENST00000622629 HMMRO75330 724 aa16■□□□□ 0.15
MSH6-215ENST00000622629 CDK19Q9BWU1 502 aa16■□□□□ 0.15
MSH6-215ENST00000622629 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
MSH6-215ENST00000622629 PLCB2Q00722 1185 aa16■□□□□ 0.15
MSH6-215ENST00000622629 CFAP44Q96MT7 982 aa16■□□□□ 0.15
MSH6-215ENST00000622629 MCCP23508 829 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 AAMPQ13685 434 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 C1orf115Q9H7X2 142 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 GNAI1P63096 354 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
MSH6-215ENST00000622629 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
MSH6-215ENST00000622629 TXNDC2Q86VQ3 553 aa15.98■□□□□ 0.15
MSH6-215ENST00000622629 MVPQ14764 893 aaKnown RBP15.97■□□□□ 0.15
MSH6-215ENST00000622629 API5Q9BZZ5 524 aaKnown RBP15.97■□□□□ 0.15
MSH6-215ENST00000622629 UHRF1BP1Q6BDS2 1440 aa15.97■□□□□ 0.15
MSH6-215ENST00000622629 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
MSH6-215ENST00000622629 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
MSH6-215ENST00000622629 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
MSH6-215ENST00000622629 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
MSH6-215ENST00000622629 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
MSH6-215ENST00000622629 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
MSH6-215ENST00000622629 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
MSH6-215ENST00000622629 NOS1P29475 1434 aa15.96■□□□□ 0.15
MSH6-215ENST00000622629 IDI1Q13907 227 aa15.96■□□□□ 0.15
MSH6-215ENST00000622629 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
MSH6-215ENST00000622629 IL27Q8NEV9 243 aa15.96■□□□□ 0.15
MSH6-215ENST00000622629 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
MSH6-215ENST00000622629 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.14
MSH6-215ENST00000622629 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
MSH6-215ENST00000622629 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 THUMPD2Q9BTF0 503 aaKnown RBP15.95■□□□□ 0.14
MSH6-215ENST00000622629 CHMP5Q9NZZ3 219 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 PLEKHH1Q9ULM0 1364 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 SHANK2Q9UPX8 1470 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 BRPF3Q9ULD4 1205 aa15.95■□□□□ 0.14
MSH6-215ENST00000622629 IGHDP01880 384 aa15.94■□□□□ 0.14
MSH6-215ENST00000622629 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
MSH6-215ENST00000622629 A2MP01023 1474 aa15.93■□□□□ 0.14
MSH6-215ENST00000622629 WAPLQ7Z5K2 1190 aa15.93■□□□□ 0.14
MSH6-215ENST00000622629 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
MSH6-215ENST00000622629 DNTTIP2Q5QJE6 756 aaKnown RBP15.93■□□□□ 0.14
MSH6-215ENST00000622629 SSH1Q8WYL5 1049 aa15.93■□□□□ 0.14
MSH6-215ENST00000622629 RILPL2Q969X0 211 aa15.93■□□□□ 0.14
MSH6-215ENST00000622629 KIAA1211Q6ZU35 1233 aa15.92■□□□□ 0.14
MSH6-215ENST00000622629 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
MSH6-215ENST00000622629 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
MSH6-215ENST00000622629 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
MSH6-215ENST00000622629 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
MSH6-215ENST00000622629 DDX11L8A8MPP1 907 aa15.91■□□□□ 0.14
MSH6-215ENST00000622629 FGD1P98174 961 aa15.91■□□□□ 0.14
MSH6-215ENST00000622629 TMEM57Q8N5G2 664 aa15.91■□□□□ 0.14
MSH6-215ENST00000622629 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
MSH6-215ENST00000622629 ST18O60284 1047 aa15.9■□□□□ 0.14
MSH6-215ENST00000622629 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
MSH6-215ENST00000622629 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
MSH6-215ENST00000622629 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
MSH6-215ENST00000622629 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
MSH6-215ENST00000622629 FBLN1P23142 703 aa15.89■□□□□ 0.13
MSH6-215ENST00000622629 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
MSH6-215ENST00000622629 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
MSH6-215ENST00000622629 FOXD4L6Q3SYB3 417 aaPredicted RBP15.89■□□□□ 0.13
MSH6-215ENST00000622629 FOXD4L3Q6VB84 417 aaPredicted RBP15.89■□□□□ 0.13
MSH6-215ENST00000622629 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
MSH6-215ENST00000622629 FKBP5Q13451 457 aaPredicted RBP15.89■□□□□ 0.13
MSH6-215ENST00000622629 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
MSH6-215ENST00000622629 TSPYL4Q9UJ04 414 aa15.89■□□□□ 0.13
MSH6-215ENST00000622629 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
MSH6-215ENST00000622629 COL17A1Q9UMD9 1497 aaPredicted RBP15.88■□□□□ 0.13
MSH6-215ENST00000622629 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
MSH6-215ENST00000622629 MSNP26038 577 aaKnown RBP15.87■□□□□ 0.13
MSH6-215ENST00000622629 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
MSH6-215ENST00000622629 CT47B1P0C2W7 299 aaPredicted RBP15.87■□□□□ 0.13
MSH6-215ENST00000622629 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
MSH6-215ENST00000622629 ASXL1Q8IXJ9 1541 aa15.87■□□□□ 0.13
MSH6-215ENST00000622629 ABCA8O94911 1581 aa15.86■□□□□ 0.13
MSH6-215ENST00000622629 FCHSD2O94868 740 aa15.86■□□□□ 0.13
MSH6-215ENST00000622629 PTMSP20962 102 aa15.86■□□□□ 0.13
MSH6-215ENST00000622629 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
MSH6-215ENST00000622629 GPRASP1Q5JY77 1395 aa15.85■□□□□ 0.13
MSH6-215ENST00000622629 TRIM27P14373 513 aa15.85■□□□□ 0.13
MSH6-215ENST00000622629 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
MSH6-215ENST00000622629 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
MSH6-215ENST00000622629 NLRP6P59044 892 aa15.84■□□□□ 0.13
MSH6-215ENST00000622629 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
MSH6-215ENST00000622629 CSB-PGBD3P0DP91 1061 aa15.83■□□□□ 0.13
MSH6-215ENST00000622629 MBD5Q9P267 1494 aa15.83■□□□□ 0.13
MSH6-215ENST00000622629 GOLGA6L4A6NEF3 574 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms