RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IDI1Q13907 227 aa12.4□□□□□ -0.42
PDPN-212ENST00000621990 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.42
PDPN-212ENST00000621990 MS4A1P11836 297 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 APAF1O14727 1248 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 AGLP35573 1532 aa12.39□□□□□ -0.43
PDPN-212ENST00000621990 PTPRMP28827 1452 aa12.38□□□□□ -0.43
PDPN-212ENST00000621990 E9PSI1 815 aa12.38□□□□□ -0.43
PDPN-212ENST00000621990 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
PDPN-212ENST00000621990 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
PDPN-212ENST00000621990 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
PDPN-212ENST00000621990 MORC1Q86VD1 984 aa12.37□□□□□ -0.43
PDPN-212ENST00000621990 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
PDPN-212ENST00000621990 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
PDPN-212ENST00000621990 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
PDPN-212ENST00000621990 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
PDPN-212ENST00000621990 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
PDPN-212ENST00000621990 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
PDPN-212ENST00000621990 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
PDPN-212ENST00000621990 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
PDPN-212ENST00000621990 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
PDPN-212ENST00000621990 MED14O60244 1454 aa12.34□□□□□ -0.43
PDPN-212ENST00000621990 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
PDPN-212ENST00000621990 ADGRB2O60241 1585 aa12.34□□□□□ -0.43
PDPN-212ENST00000621990 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
PDPN-212ENST00000621990 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
PDPN-212ENST00000621990 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
PDPN-212ENST00000621990 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
PDPN-212ENST00000621990 SPATA31D1Q6ZQQ2 1576 aa12.33□□□□□ -0.44
PDPN-212ENST00000621990 ERICH6Q7L0X2 663 aa12.33□□□□□ -0.44
PDPN-212ENST00000621990 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
PDPN-212ENST00000621990 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
PDPN-212ENST00000621990 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
PDPN-212ENST00000621990 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
PDPN-212ENST00000621990 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
PDPN-212ENST00000621990 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
PDPN-212ENST00000621990 PDE4AP27815 886 aa12.32□□□□□ -0.44
PDPN-212ENST00000621990 CENPQQ7L2Z9 268 aaPredicted RBP12.32□□□□□ -0.44
PDPN-212ENST00000621990 CD163L1Q9NR16 1453 aa12.32□□□□□ -0.44
PDPN-212ENST00000621990 A0A1W2PP64 1363 aa12.32□□□□□ -0.44
PDPN-212ENST00000621990 CCDC27Q2M243 656 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 MTHFSP49914 203 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
PDPN-212ENST00000621990 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
PDPN-212ENST00000621990 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
PDPN-212ENST00000621990 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
PDPN-212ENST00000621990 WDR63Q8IWG1 891 aa12.29□□□□□ -0.44
PDPN-212ENST00000621990 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
PDPN-212ENST00000621990 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
PDPN-212ENST00000621990 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
PDPN-212ENST00000621990 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
PDPN-212ENST00000621990 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
PDPN-212ENST00000621990 BCAR3O75815 825 aa12.28□□□□□ -0.44
PDPN-212ENST00000621990 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
PDPN-212ENST00000621990 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
PDPN-212ENST00000621990 TCP11L2Q8N4U5 519 aa12.28□□□□□ -0.44
PDPN-212ENST00000621990 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.44
PDPN-212ENST00000621990 PRAM1Q96QH2 718 aa12.27□□□□□ -0.45
PDPN-212ENST00000621990 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
PDPN-212ENST00000621990 STK26Q9P289 416 aa12.25□□□□□ -0.45
PDPN-212ENST00000621990 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
PDPN-212ENST00000621990 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
PDPN-212ENST00000621990 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
PDPN-212ENST00000621990 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPN-212ENST00000621990 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
PDPN-212ENST00000621990 ATP7BP35670 1465 aa12.24□□□□□ -0.45
PDPN-212ENST00000621990 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
PDPN-212ENST00000621990 FYB1O15117 783 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
PDPN-212ENST00000621990 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 KIF13AQ9H1H9 1805 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 RIMS2Q9UQ26 1411 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
PDPN-212ENST00000621990 AAMPQ13685 434 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
PDPN-212ENST00000621990 POGKQ9P215 609 aa12.22□□□□□ -0.45
PDPN-212ENST00000621990 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
PDPN-212ENST00000621990 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
PDPN-212ENST00000621990 CDK19Q9BWU1 502 aa12.21□□□□□ -0.45
PDPN-212ENST00000621990 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.46
PDPN-212ENST00000621990 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.46
PDPN-212ENST00000621990 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
PDPN-212ENST00000621990 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
PDPN-212ENST00000621990 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
PDPN-212ENST00000621990 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
PDPN-212ENST00000621990 HDGFL2Q7Z4V5 671 aaPredicted RBP12.2□□□□□ -0.46
PDPN-212ENST00000621990 CLUAP1Q96AJ1 413 aa12.19□□□□□ -0.46
PDPN-212ENST00000621990 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
PDPN-212ENST00000621990 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
PDPN-212ENST00000621990 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
PDPN-212ENST00000621990 TECPR2O15040 1411 aa12.19□□□□□ -0.46
PDPN-212ENST00000621990 IL16Q14005 1332 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms