RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TERF2IPQ9NYB0 399 aa13.95□□□□□ -0.18
VPS11-208ENST00000621676 TET3O43151 1660 aa13.95□□□□□ -0.18
VPS11-208ENST00000621676 FOXO3O43524 673 aa13.94□□□□□ -0.18
VPS11-208ENST00000621676 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
VPS11-208ENST00000621676 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
VPS11-208ENST00000621676 CLUAP1Q96AJ1 413 aa13.93□□□□□ -0.18
VPS11-208ENST00000621676 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
VPS11-208ENST00000621676 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
VPS11-208ENST00000621676 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
VPS11-208ENST00000621676 RICTORQ6R327 1708 aa13.92□□□□□ -0.18
VPS11-208ENST00000621676 YTHDC2Q9H6S0 1430 aaKnown RBP13.92□□□□□ -0.18
VPS11-208ENST00000621676 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
VPS11-208ENST00000621676 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
VPS11-208ENST00000621676 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
VPS11-208ENST00000621676 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS11-208ENST00000621676 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
VPS11-208ENST00000621676 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
VPS11-208ENST00000621676 SYNMO15061 1565 aa13.91□□□□□ -0.18
VPS11-208ENST00000621676 A0A1W2PP64 1363 aa13.91□□□□□ -0.18
VPS11-208ENST00000621676 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
VPS11-208ENST00000621676 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
VPS11-208ENST00000621676 TSR2Q969E8 191 aaKnown RBP13.9□□□□□ -0.18
VPS11-208ENST00000621676 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
VPS11-208ENST00000621676 MADDQ8WXG6 1647 aa13.9□□□□□ -0.18
VPS11-208ENST00000621676 TCP11L2Q8N4U5 519 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
VPS11-208ENST00000621676 NLRP6P59044 892 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
VPS11-208ENST00000621676 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
VPS11-208ENST00000621676 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 PRR36Q9H6K5 1346 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 ACEP12821 1306 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 USHBP1Q8N6Y0 703 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
VPS11-208ENST00000621676 BCAR3O75815 825 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
VPS11-208ENST00000621676 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 KIF1BO60333 1816 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 VWDEQ8N2E2 1590 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 CABLES1Q8TDN4 633 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
VPS11-208ENST00000621676 COG3Q96JB2 828 aa13.85□□□□□ -0.19
VPS11-208ENST00000621676 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
VPS11-208ENST00000621676 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
VPS11-208ENST00000621676 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
VPS11-208ENST00000621676 AEBP1Q8IUX7 1158 aa13.85□□□□□ -0.19
VPS11-208ENST00000621676 MIS18AQ9NYP9 233 aa13.85□□□□□ -0.19
VPS11-208ENST00000621676 MYO5BQ9ULV0 1848 aa13.84□□□□□ -0.19
VPS11-208ENST00000621676 PSME1Q06323 249 aa13.84□□□□□ -0.19
VPS11-208ENST00000621676 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
VPS11-208ENST00000621676 GLI2P10070 1586 aa13.83□□□□□ -0.2
VPS11-208ENST00000621676 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
VPS11-208ENST00000621676 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
VPS11-208ENST00000621676 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
VPS11-208ENST00000621676 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
VPS11-208ENST00000621676 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 ADGRB3O60242 1522 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 AMPHP49418 695 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
VPS11-208ENST00000621676 A0A0G2JS52 829 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
VPS11-208ENST00000621676 DIAPH1O60610 1272 aaKnown RBP13.81□□□□□ -0.2
VPS11-208ENST00000621676 RIPK4P57078 832 aa13.81□□□□□ -0.2
VPS11-208ENST00000621676 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
VPS11-208ENST00000621676 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
VPS11-208ENST00000621676 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
VPS11-208ENST00000621676 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
VPS11-208ENST00000621676 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
VPS11-208ENST00000621676 ARHGAP31Q2M1Z3 1444 aa13.79□□□□□ -0.2
VPS11-208ENST00000621676 NEFMP07197 916 aa13.79□□□□□ -0.2
VPS11-208ENST00000621676 CRBNQ96SW2 442 aa13.78□□□□□ -0.2
VPS11-208ENST00000621676 PANK1Q8TE04 598 aa13.77□□□□□ -0.2
VPS11-208ENST00000621676 EIF2AK4Q9P2K8 1649 aaKnown RBP13.77□□□□□ -0.2
VPS11-208ENST00000621676 LMTK2Q8IWU2 1503 aa13.77□□□□□ -0.2
VPS11-208ENST00000621676 KRT24Q2M2I5 525 aa13.77□□□□□ -0.21
VPS11-208ENST00000621676 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
VPS11-208ENST00000621676 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
VPS11-208ENST00000621676 PTPRMP28827 1452 aa13.76□□□□□ -0.21
VPS11-208ENST00000621676 MYOM2P54296 1465 aa13.76□□□□□ -0.21
VPS11-208ENST00000621676 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
VPS11-208ENST00000621676 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
VPS11-208ENST00000621676 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
VPS11-208ENST00000621676 MCM10Q7L590 875 aa13.75□□□□□ -0.21
VPS11-208ENST00000621676 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
VPS11-208ENST00000621676 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms