RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 FYCO1Q9BQS8 1478 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 ADGRL3Q9HAR2 1447 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 CDC42BPAQ5VT25 1732 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 TRIM37O94972 964 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 CHGAP10645 457 aaKnown RBP3.79□□□□□ -1.8
CPNE3-211ENST00000621526 PTGER2P43116 358 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 FAM98CQ17RN3 349 aaKnown RBP3.79□□□□□ -1.8
CPNE3-211ENST00000621526 KRT28Q7Z3Y7 464 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 DNAJC5GQ8N7S2 189 aa3.79□□□□□ -1.8
CPNE3-211ENST00000621526 A0A0G2JS52 829 aa3.78□□□□□ -1.8
CPNE3-211ENST00000621526 MYT1Q01538 1121 aa3.78□□□□□ -1.8
CPNE3-211ENST00000621526 FHDC1Q9C0D6 1143 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-211ENST00000621526 LMTK2Q8IWU2 1503 aa3.78□□□□□ -1.8
CPNE3-211ENST00000621526 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-211ENST00000621526 ERBINQ96RT1 1412 aa3.78□□□□□ -1.8
CPNE3-211ENST00000621526 METP08581 1390 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 KIF15Q9NS87 1388 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 SPATA31A5Q5VU36 1347 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 SPATA31A7Q8IWB4 1347 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 DUOX2Q9NRD8 1548 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 VGFO15240 615 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-211ENST00000621526 GRIN3BO60391 1043 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 HAP1P54257 671 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-211ENST00000621526 PDE3BQ13370 1112 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 GPR162Q16538 588 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 FAM182BQ5T319 152 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 BTG4Q9NY30 223 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 MYOM3Q5VTT5 1437 aa3.77□□□□□ -1.81
CPNE3-211ENST00000621526 CHD2O14647 1828 aaKnown RBP3.77□□□□□ -1.81
CPNE3-211ENST00000621526 ARHGEF5Q12774 1597 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 EHBP1L1Q8N3D4 1523 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 APLP1P51693 650 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 COL13A1Q5TAT6 717 aaPredicted RBP3.76□□□□□ -1.81
CPNE3-211ENST00000621526 BARGINQ6ZT62 677 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 SIRT1Q96EB6 747 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 ARXQ96QS3 562 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 SGIP1Q9BQI5 828 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 MTFR1LQ9H019 292 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 PIK3C2BO00750 1634 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 MAP3K5Q99683 1374 aa3.76□□□□□ -1.81
CPNE3-211ENST00000621526 ADGRB3O60242 1522 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 UTRNP46939 3433 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 XPCQ01831 940 aaPredicted RBP3.75□□□□□ -1.81
CPNE3-211ENST00000621526 PROM2Q8N271 834 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 JMYQ8N9B5 988 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 CABLES1Q8TDN4 633 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 ATF5Q9Y2D1 282 aaPredicted RBP3.75□□□□□ -1.81
CPNE3-211ENST00000621526 GLI3P10071 1580 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 SBNO1A3KN83 1393 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 ANKRD30AQ9BXX3 1397 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 TRPM2O94759 1503 aa3.75□□□□□ -1.81
CPNE3-211ENST00000621526 SPATA31A1Q5TZJ5 1347 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 ADGRL2O95490 1459 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 LAMC1P11047 1609 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 EIF2AK4Q9P2K8 1649 aaKnown RBP3.74□□□□□ -1.81
CPNE3-211ENST00000621526 HFM1A2PYH4 1435 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 ZBTB7AO95365 584 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 SLC15A2Q16348 729 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 SPHKAPQ2M3C7 1700 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 ZNF326Q5BKZ1 582 aaKnown RBP3.74□□□□□ -1.81
CPNE3-211ENST00000621526 TNS4Q8IZW8 715 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 SLC16A10Q8TF71 515 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 BCL11BQ9C0K0 894 aaPredicted RBP3.74□□□□□ -1.81
CPNE3-211ENST00000621526 GPBP1L1Q9HC44 474 aaPredicted RBP3.74□□□□□ -1.81
CPNE3-211ENST00000621526 THRAP3Q9Y2W1 955 aaKnown RBP3.74□□□□□ -1.81
CPNE3-211ENST00000621526 ARHGEF10O15013 1369 aa3.74□□□□□ -1.81
CPNE3-211ENST00000621526 PXDNQ92626 1479 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 RPGRIP1LQ68CZ1 1315 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 ABCC5O15440 1437 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 PDGFDQ9GZP0 370 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-211ENST00000621526 STK32BQ9NY57 414 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 CHIC2Q9UKJ5 165 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 PHF8Q9UPP1 1060 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 AATKQ6ZMQ8 1374 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 ROBO2Q9HCK4 1378 aa3.73□□□□□ -1.81
CPNE3-211ENST00000621526 COL22A1Q8NFW1 1626 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-211ENST00000621526 CCDC144AA2RUR9 1427 aa3.72□□□□□ -1.81
CPNE3-211ENST00000621526 PRAG1Q86YV5 1406 aa3.72□□□□□ -1.81
CPNE3-211ENST00000621526 TOMM70O94826 608 aa3.72□□□□□ -1.81
CPNE3-211ENST00000621526 EVA1CP58658 441 aa3.72□□□□□ -1.81
CPNE3-211ENST00000621526 TCP11L2Q8N4U5 519 aa3.72□□□□□ -1.81
CPNE3-211ENST00000621526 LRRIQ1Q96JM4 1722 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 CAPN15O75808 1086 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 TXNRD1Q16881 649 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 LMOD2Q6P5Q4 547 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 WAPLQ7Z5K2 1190 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 KLRG1Q96E93 195 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 ANO8Q9HCE9 1232 aaPredicted RBP3.71□□□□□ -1.82
CPNE3-211ENST00000621526 PRDM11Q9NQV5 511 aa3.71□□□□□ -1.82
CPNE3-211ENST00000621526 TMEM131LA2VDJ0 1609 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 NUTM2FA1L443 756 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 KIF3CO14782 793 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 POLD1P28340 1107 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 KANK4Q5T7N3 995 aaPredicted RBP3.7□□□□□ -1.82
CPNE3-211ENST00000621526 WWC3Q9ULE0 1092 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 ABCC11Q96J66 1382 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 CFAP65Q6ZU64 1925 aaKnown RBP3.7□□□□□ -1.82
CPNE3-211ENST00000621526 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.7□□□□□ -1.82
CPNE3-211ENST00000621526 TNS3Q68CZ2 1445 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 RRBP1Q9P2E9 1410 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms