RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
GGA3-222ENST00000621217 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
GGA3-222ENST00000621217 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
GGA3-222ENST00000621217 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
GGA3-222ENST00000621217 C14orf93Q9H972 538 aaKnown RBP11.47□□□□□ -0.57
GGA3-222ENST00000621217 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
GGA3-222ENST00000621217 ARHGEF12Q9NZN5 1544 aa11.46□□□□□ -0.57
GGA3-222ENST00000621217 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
GGA3-222ENST00000621217 THUMPD2Q9BTF0 503 aaKnown RBP11.46□□□□□ -0.57
GGA3-222ENST00000621217 PRKAR2BP31323 418 aa11.46□□□□□ -0.58
GGA3-222ENST00000621217 RWDD1Q9H446 243 aaPredicted RBP11.46□□□□□ -0.58
GGA3-222ENST00000621217 SAMD9LQ8IVG5 1584 aa11.46□□□□□ -0.58
GGA3-222ENST00000621217 NME9Q86XW9 330 aa11.46□□□□□ -0.58
GGA3-222ENST00000621217 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
GGA3-222ENST00000621217 THEMISQ8N1K5 641 aaPredicted RBP11.45□□□□□ -0.58
GGA3-222ENST00000621217 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
GGA3-222ENST00000621217 GZF1Q9H116 711 aaPredicted RBP11.45□□□□□ -0.58
GGA3-222ENST00000621217 USP35Q9P2H5 1018 aa11.45□□□□□ -0.58
GGA3-222ENST00000621217 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
GGA3-222ENST00000621217 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
GGA3-222ENST00000621217 DUSP27Q5VZP5 1158 aa11.45□□□□□ -0.58
GGA3-222ENST00000621217 ABTB2Q8N961 1025 aa11.45□□□□□ -0.58
GGA3-222ENST00000621217 SLFN5Q08AF3 891 aa11.44□□□□□ -0.58
GGA3-222ENST00000621217 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
GGA3-222ENST00000621217 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
GGA3-222ENST00000621217 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
GGA3-222ENST00000621217 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
GGA3-222ENST00000621217 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
GGA3-222ENST00000621217 HSP90AA2PQ14568 343 aaPredicted RBP11.43□□□□□ -0.58
GGA3-222ENST00000621217 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
GGA3-222ENST00000621217 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
GGA3-222ENST00000621217 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
GGA3-222ENST00000621217 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
GGA3-222ENST00000621217 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
GGA3-222ENST00000621217 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
GGA3-222ENST00000621217 GOLGA6L22H0YM25 854 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 ZKSCAN2Q63HK3 967 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 MS4A1P11836 297 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
GGA3-222ENST00000621217 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 CCDC61Q9Y6R9 512 aa11.42□□□□□ -0.58
GGA3-222ENST00000621217 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
GGA3-222ENST00000621217 ATP7AQ04656 1500 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 TNNQ9UQP3 1299 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 DCTN1Q14203 1278 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 DZIP1LQ8IYY4 767 aaKnown RBP11.41□□□□□ -0.58
GGA3-222ENST00000621217 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
GGA3-222ENST00000621217 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.58
GGA3-222ENST00000621217 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
GGA3-222ENST00000621217 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
GGA3-222ENST00000621217 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
GGA3-222ENST00000621217 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
GGA3-222ENST00000621217 C1orf115Q9H7X2 142 aa11.4□□□□□ -0.58
GGA3-222ENST00000621217 LNPKQ9C0E8 428 aa11.39□□□□□ -0.59
GGA3-222ENST00000621217 ZCCHC11Q5TAX3 1644 aaKnown RBP11.39□□□□□ -0.59
GGA3-222ENST00000621217 CDC42BPAQ5VT25 1732 aa11.39□□□□□ -0.59
GGA3-222ENST00000621217 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
GGA3-222ENST00000621217 TSPOAP1O95153 1857 aa11.39□□□□□ -0.59
GGA3-222ENST00000621217 FOXO3O43524 673 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 ANKRD45Q5TZF3 282 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 ANKLE2Q86XL3 938 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
GGA3-222ENST00000621217 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 UHRF1BP1Q6BDS2 1440 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 MIS18AQ9NYP9 233 aa11.38□□□□□ -0.59
GGA3-222ENST00000621217 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
GGA3-222ENST00000621217 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
GGA3-222ENST00000621217 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
GGA3-222ENST00000621217 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
GGA3-222ENST00000621217 BCORL1Q5H9F3 1711 aa11.37□□□□□ -0.59
GGA3-222ENST00000621217 IGHDP01880 384 aa11.36□□□□□ -0.59
GGA3-222ENST00000621217 PTMAP06454 111 aaKnown RBP11.36□□□□□ -0.59
GGA3-222ENST00000621217 ATF3P18847 181 aa11.36□□□□□ -0.59
GGA3-222ENST00000621217 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
GGA3-222ENST00000621217 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
GGA3-222ENST00000621217 NPATQ14207 1427 aa11.36□□□□□ -0.59
GGA3-222ENST00000621217 USHBP1Q8N6Y0 703 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
GGA3-222ENST00000621217 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
GGA3-222ENST00000621217 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 FYB1O15117 783 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
GGA3-222ENST00000621217 NFKBIBQ15653 356 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 NLRP2Q9NX02 1062 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 HSPA2P54652 639 aa11.35□□□□□ -0.59
GGA3-222ENST00000621217 POGZQ7Z3K3 1410 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 FRAT2O75474 233 aaPredicted RBP11.34□□□□□ -0.59
GGA3-222ENST00000621217 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 MSNP26038 577 aaKnown RBP11.34□□□□□ -0.59
GGA3-222ENST00000621217 TEFQ10587 303 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 GSE1Q14687 1217 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
GGA3-222ENST00000621217 TNRQ92752 1358 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms