RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 CFAP65Q6ZU64 1925 aaKnown RBP11.81□□□□□ -0.52
SENP3-210ENST00000619785 SCAF11Q99590 1463 aaKnown RBP11.81□□□□□ -0.52
SENP3-210ENST00000619785 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
SENP3-210ENST00000619785 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
SENP3-210ENST00000619785 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
SENP3-210ENST00000619785 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
SENP3-210ENST00000619785 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
SENP3-210ENST00000619785 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
SENP3-210ENST00000619785 ROBO1Q9Y6N7 1651 aa11.79□□□□□ -0.52
SENP3-210ENST00000619785 PRDM15P57071 1507 aaPredicted RBP11.79□□□□□ -0.52
SENP3-210ENST00000619785 KIF3BO15066 747 aa11.78□□□□□ -0.52
SENP3-210ENST00000619785 ARXQ96QS3 562 aa11.78□□□□□ -0.52
SENP3-210ENST00000619785 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
SENP3-210ENST00000619785 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
SENP3-210ENST00000619785 TET3O43151 1660 aa11.78□□□□□ -0.52
SENP3-210ENST00000619785 SETD1AO15047 1707 aaKnown RBP11.77□□□□□ -0.52
SENP3-210ENST00000619785 MFSD10Q14728 455 aa11.77□□□□□ -0.53
SENP3-210ENST00000619785 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
SENP3-210ENST00000619785 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
SENP3-210ENST00000619785 MS4A4AQ96JQ5 239 aa11.74□□□□□ -0.53
SENP3-210ENST00000619785 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
SENP3-210ENST00000619785 CROCC2H7BZ55 1655 aa11.73□□□□□ -0.53
SENP3-210ENST00000619785 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
SENP3-210ENST00000619785 ZMYND10O75800 440 aa11.73□□□□□ -0.53
SENP3-210ENST00000619785 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
SENP3-210ENST00000619785 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
SENP3-210ENST00000619785 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
SENP3-210ENST00000619785 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
SENP3-210ENST00000619785 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
SENP3-210ENST00000619785 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
SENP3-210ENST00000619785 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
SENP3-210ENST00000619785 LMTK2Q8IWU2 1503 aa11.71□□□□□ -0.53
SENP3-210ENST00000619785 DUOX2Q9NRD8 1548 aa11.71□□□□□ -0.53
SENP3-210ENST00000619785 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
SENP3-210ENST00000619785 LTKP29376 864 aa11.71□□□□□ -0.53
SENP3-210ENST00000619785 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
SENP3-210ENST00000619785 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
SENP3-210ENST00000619785 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
SENP3-210ENST00000619785 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
SENP3-210ENST00000619785 TMEM2Q9UHN6 1383 aa11.68□□□□□ -0.54
SENP3-210ENST00000619785 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
SENP3-210ENST00000619785 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
SENP3-210ENST00000619785 ERBINQ96RT1 1412 aa11.67□□□□□ -0.54
SENP3-210ENST00000619785 TMEM94Q12767 1356 aa11.67□□□□□ -0.54
SENP3-210ENST00000619785 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
SENP3-210ENST00000619785 AHDC1Q5TGY3 1603 aaPredicted RBP11.66□□□□□ -0.54
SENP3-210ENST00000619785 FGD6Q6ZV73 1430 aa11.66□□□□□ -0.54
SENP3-210ENST00000619785 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
SENP3-210ENST00000619785 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.54
SENP3-210ENST00000619785 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
SENP3-210ENST00000619785 KCNA6P17658 529 aa11.65□□□□□ -0.54
SENP3-210ENST00000619785 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
SENP3-210ENST00000619785 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.54
SENP3-210ENST00000619785 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
SENP3-210ENST00000619785 DIP2AQ14689 1571 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 NOS1P29475 1434 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
SENP3-210ENST00000619785 JCADQ9P266 1359 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 LRP6O75581 1613 aa11.64□□□□□ -0.55
SENP3-210ENST00000619785 AK7Q96M32 723 aa11.63□□□□□ -0.55
SENP3-210ENST00000619785 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
SENP3-210ENST00000619785 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
SENP3-210ENST00000619785 RBM26Q5T8P6 1007 aaKnown RBP11.61□□□□□ -0.55
SENP3-210ENST00000619785 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
SENP3-210ENST00000619785 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.6□□□□□ -0.55
SENP3-210ENST00000619785 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
SENP3-210ENST00000619785 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
SENP3-210ENST00000619785 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
SENP3-210ENST00000619785 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
SENP3-210ENST00000619785 SPATA31A6Q5VVP1 1343 aa11.59□□□□□ -0.55
SENP3-210ENST00000619785 GCC2Q8IWJ2 1684 aa11.59□□□□□ -0.55
SENP3-210ENST00000619785 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
SENP3-210ENST00000619785 TMEM131LA2VDJ0 1609 aa11.58□□□□□ -0.56
SENP3-210ENST00000619785 NHSL1Q5SYE7 1610 aa11.58□□□□□ -0.56
SENP3-210ENST00000619785 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
SENP3-210ENST00000619785 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
SENP3-210ENST00000619785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.56
SENP3-210ENST00000619785 MSH6P52701 1360 aa11.57□□□□□ -0.56
SENP3-210ENST00000619785 KIF15Q9NS87 1388 aa11.56□□□□□ -0.56
SENP3-210ENST00000619785 ABCC5O15440 1437 aa11.56□□□□□ -0.56
SENP3-210ENST00000619785 SLAIN2Q9P270 581 aa11.56□□□□□ -0.56
SENP3-210ENST00000619785 LAMC1P11047 1609 aa11.56□□□□□ -0.56
SENP3-210ENST00000619785 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
SENP3-210ENST00000619785 IDI1Q13907 227 aa11.55□□□□□ -0.56
SENP3-210ENST00000619785 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
SENP3-210ENST00000619785 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
SENP3-210ENST00000619785 SPDYE16A6NNV3 312 aaPredicted RBP11.54□□□□□ -0.56
SENP3-210ENST00000619785 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
SENP3-210ENST00000619785 DCCP43146 1447 aa11.53□□□□□ -0.56
SENP3-210ENST00000619785 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
SENP3-210ENST00000619785 ADGRL2O95490 1459 aa11.53□□□□□ -0.56
SENP3-210ENST00000619785 XRN1Q8IZH2 1706 aaKnown RBP11.53□□□□□ -0.56
SENP3-210ENST00000619785 DPYSL4O14531 572 aa11.53□□□□□ -0.56
SENP3-210ENST00000619785 TIE1P35590 1138 aa11.53□□□□□ -0.56
SENP3-210ENST00000619785 ZNF772Q68DY9 489 aaPredicted RBP11.53□□□□□ -0.56
SENP3-210ENST00000619785 PROSER2Q86WR7 435 aaPredicted RBP11.53□□□□□ -0.56
SENP3-210ENST00000619785 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms