RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
RDM1-225ENST00000619368 CDC42BPGQ6DT37 1551 aa13.56□□□□□ -0.24
RDM1-225ENST00000619368 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
RDM1-225ENST00000619368 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
RDM1-225ENST00000619368 STK26Q9P289 416 aa13.55□□□□□ -0.24
RDM1-225ENST00000619368 RGS12O14924 1447 aa13.55□□□□□ -0.24
RDM1-225ENST00000619368 KNDC1Q76NI1 1749 aa13.54□□□□□ -0.24
RDM1-225ENST00000619368 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
RDM1-225ENST00000619368 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
RDM1-225ENST00000619368 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
RDM1-225ENST00000619368 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
RDM1-225ENST00000619368 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
RDM1-225ENST00000619368 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
RDM1-225ENST00000619368 ANKRD30BQ9BXX2 1392 aa13.53□□□□□ -0.24
RDM1-225ENST00000619368 LRPPRCP42704 1394 aaKnown RBP13.52□□□□□ -0.25
RDM1-225ENST00000619368 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
RDM1-225ENST00000619368 TECPR2O15040 1411 aa13.52□□□□□ -0.25
RDM1-225ENST00000619368 PXDNQ92626 1479 aa13.52□□□□□ -0.25
RDM1-225ENST00000619368 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 PIK3C2GO75747 1445 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 FOXO3O43524 673 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
RDM1-225ENST00000619368 USP21Q9UK80 565 aa13.51□□□□□ -0.25
RDM1-225ENST00000619368 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
RDM1-225ENST00000619368 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
RDM1-225ENST00000619368 MYOM2P54296 1465 aa13.49□□□□□ -0.25
RDM1-225ENST00000619368 YTHDC2Q9H6S0 1430 aaKnown RBP13.48□□□□□ -0.25
RDM1-225ENST00000619368 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
RDM1-225ENST00000619368 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
RDM1-225ENST00000619368 ATRNO75882 1429 aa13.47□□□□□ -0.25
RDM1-225ENST00000619368 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
RDM1-225ENST00000619368 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.25
RDM1-225ENST00000619368 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
RDM1-225ENST00000619368 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
RDM1-225ENST00000619368 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
RDM1-225ENST00000619368 SPATA31A3Q5VYP0 1347 aa13.43□□□□□ -0.26
RDM1-225ENST00000619368 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
RDM1-225ENST00000619368 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
RDM1-225ENST00000619368 EP400Q96L91 3159 aa13.42□□□□□ -0.26
RDM1-225ENST00000619368 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
RDM1-225ENST00000619368 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
RDM1-225ENST00000619368 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
RDM1-225ENST00000619368 SAFB2Q14151 953 aaKnown RBP eCLIP13.41□□□□□ -0.26
RDM1-225ENST00000619368 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
RDM1-225ENST00000619368 RAB3GAP2Q9H2M9 1393 aa13.41□□□□□ -0.26
RDM1-225ENST00000619368 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
RDM1-225ENST00000619368 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
RDM1-225ENST00000619368 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
RDM1-225ENST00000619368 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
RDM1-225ENST00000619368 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
RDM1-225ENST00000619368 GLI3P10071 1580 aa13.39□□□□□ -0.27
RDM1-225ENST00000619368 SLIT2O94813 1529 aa13.39□□□□□ -0.27
RDM1-225ENST00000619368 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
RDM1-225ENST00000619368 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
RDM1-225ENST00000619368 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
RDM1-225ENST00000619368 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
RDM1-225ENST00000619368 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
RDM1-225ENST00000619368 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RDM1-225ENST00000619368 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
RDM1-225ENST00000619368 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
RDM1-225ENST00000619368 PSME1Q06323 249 aa13.36□□□□□ -0.27
RDM1-225ENST00000619368 POGKQ9P215 609 aa13.36□□□□□ -0.27
RDM1-225ENST00000619368 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
RDM1-225ENST00000619368 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
RDM1-225ENST00000619368 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
RDM1-225ENST00000619368 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
RDM1-225ENST00000619368 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
RDM1-225ENST00000619368 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
RDM1-225ENST00000619368 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
RDM1-225ENST00000619368 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
RDM1-225ENST00000619368 HIRIP3Q9BW71 556 aaPredicted RBP13.34□□□□□ -0.27
RDM1-225ENST00000619368 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
RDM1-225ENST00000619368 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
RDM1-225ENST00000619368 DCAF11Q8TEB1 546 aa13.33□□□□□ -0.28
RDM1-225ENST00000619368 ALS2Q96Q42 1657 aa13.33□□□□□ -0.28
RDM1-225ENST00000619368 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
RDM1-225ENST00000619368 SRCAPQ6ZRS2 3230 aa13.33□□□□□ -0.28
RDM1-225ENST00000619368 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
RDM1-225ENST00000619368 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
RDM1-225ENST00000619368 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
RDM1-225ENST00000619368 ARHGEF28Q8N1W1 1705 aaKnown RBP13.31□□□□□ -0.28
RDM1-225ENST00000619368 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
RDM1-225ENST00000619368 VPS72Q15906 364 aa13.31□□□□□ -0.28
RDM1-225ENST00000619368 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
RDM1-225ENST00000619368 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
RDM1-225ENST00000619368 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
RDM1-225ENST00000619368 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
RDM1-225ENST00000619368 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
RDM1-225ENST00000619368 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
RDM1-225ENST00000619368 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
RDM1-225ENST00000619368 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
RDM1-225ENST00000619368 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
RDM1-225ENST00000619368 ITSN1Q15811 1721 aa13.27□□□□□ -0.28
RDM1-225ENST00000619368 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.28
RDM1-225ENST00000619368 GPRASP1Q5JY77 1395 aa13.27□□□□□ -0.29
RDM1-225ENST00000619368 HRCP23327 699 aa13.26□□□□□ -0.29
RDM1-225ENST00000619368 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
RDM1-225ENST00000619368 DEFB132Q7Z7B7 95 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms