RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ABCC8Q09428 1581 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 NAA30Q147X3 362 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 GTPBP4Q9BZE4 634 aaKnown RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 HOOK1Q9UJC3 728 aaKnown RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 ANTXR1Q9H6X2 564 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 ZHX1Q9UKY1 873 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 WAPLQ7Z5K2 1190 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 CPA1P15085 419 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 GGT6Q6P531 493 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 ARGLU1Q9NWB6 273 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 SETSIPP0DME0 302 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 GADD45BO75293 160 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 FOSBP53539 338 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 NUTM2GQ5VZR2 741 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 KIAA1211Q6ZU35 1233 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 ZGPATQ8N5A5 531 aaKnown RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 KIF3AQ9Y496 699 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 ERBB4Q15303 1308 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 TRMT2AQ8IZ69 625 aaKnown RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 SYTL4Q96C24 671 aaPredicted RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 MTUS2Q5JR59 1369 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 HSCBQ8IWL3 235 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 CALCOCO1Q9P1Z2 691 aa3.75□□□□□ -1.81
NEB-220ENST00000618972 CCP110O43303 1012 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 NEXNQ0ZGT2 675 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 TNPO1Q92973 898 aaKnown RBP3.74□□□□□ -1.81
NEB-220ENST00000618972 HSP90B2PQ58FF3 399 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 SIRT2Q8IXJ6 389 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 MLECQ14165 292 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 F6X3S4 739 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 PKP1Q13835 747 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 ZCCHC6Q5VYS8 1495 aaKnown RBP3.74□□□□□ -1.81
NEB-220ENST00000618972 ZNF622Q969S3 477 aaKnown RBP eCLIP3.74□□□□□ -1.81
NEB-220ENST00000618972 A0A087WWV3 80 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 PAXBP1Q9Y5B6 917 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 CENPJQ9HC77 1338 aaPredicted RBP3.74□□□□□ -1.81
NEB-220ENST00000618972 CBX1P83916 185 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 PODNQ7Z5L7 613 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 NAT10Q9H0A0 1025 aaKnown RBP3.74□□□□□ -1.81
NEB-220ENST00000618972 CABP1Q9NZU7 370 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 DYDC1Q8WWB3 177 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 MCM2P49736 904 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 TMF1P82094 1093 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 ANKRD30BQ9BXX2 1392 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 GOLGA6L10A0A0M3HER8 536 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 SMC4Q9NTJ3 1288 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 KIF3BO15066 747 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 CHMP5Q9NZZ3 219 aa3.74□□□□□ -1.81
NEB-220ENST00000618972 V9GYY5 206 aaPredicted RBP3.74□□□□□ -1.81
NEB-220ENST00000618972 KDM2BQ8NHM5 1336 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 MYBBP1AQ9BQG0 1328 aaKnown RBP3.73□□□□□ -1.81
NEB-220ENST00000618972 PRIM1P49642 420 aaKnown RBP3.73□□□□□ -1.81
NEB-220ENST00000618972 FGD1P98174 961 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 DZIP1LQ8IYY4 767 aaKnown RBP3.73□□□□□ -1.81
NEB-220ENST00000618972 EIF3DO15371 548 aaKnown RBP eCLIP3.73□□□□□ -1.81
NEB-220ENST00000618972 KIF20AO95235 890 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 KIF3CO14782 793 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 HMGB3O15347 200 aaKnown RBP3.73□□□□□ -1.81
NEB-220ENST00000618972 DDX11Q96FC9 970 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 SLC4A10Q6U841 1118 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 DHX29Q7Z478 1369 aaKnown RBP3.73□□□□□ -1.81
NEB-220ENST00000618972 G2E3Q7L622 706 aa3.73□□□□□ -1.81
NEB-220ENST00000618972 RNF20Q5VTR2 975 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 KTN1Q86UP2 1357 aaKnown RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 ZRSR2Q15696 482 aaKnown RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 FAM83GA6ND36 823 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 CCDC27Q2M243 656 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 AEBP1Q8IUX7 1158 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 PSMD1Q99460 953 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 VPS8Q8N3P4 1428 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 NECAB1Q8N987 351 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 CFAP53Q96M91 514 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 ESPNB1AK53 854 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 CAVIN2O95810 425 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 SMG6Q86US8 1419 aaKnown RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 E9PSI1 815 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 MCM3P25205 808 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 HS1BP3Q53T59 392 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 FOXO3O43524 673 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 PLEKHH1Q9ULM0 1364 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 EEA1Q15075 1411 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 ZFP91Q96JP5 570 aaPredicted RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 RPAINQ86UA6 219 aa3.72□□□□□ -1.81
NEB-220ENST00000618972 NOC3LQ8WTT2 800 aaKnown RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 FBXO31Q5XUX0 539 aaPredicted RBP3.72□□□□□ -1.81
NEB-220ENST00000618972 FEZ1Q99689 392 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 CCDC39Q9UFE4 941 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 SPC24Q8NBT2 197 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 ADGRF5Q8IZF2 1346 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 MINK1Q8N4C8 1332 aaPredicted RBP3.71□□□□□ -1.81
NEB-220ENST00000618972 FSD2A1L4K1 749 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 FAM173BQ6P4H8 233 aa3.71□□□□□ -1.81
NEB-220ENST00000618972 DDX49Q9Y6V7 483 aaKnown RBP3.71□□□□□ -1.82
NEB-220ENST00000618972 ZDHHC9Q9Y397 364 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 STAC3Q96MF2 364 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 TRIM35Q9UPQ4 493 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 FHOD3Q2V2M9 1422 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 COL9A3Q14050 684 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms