RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
TARDBP-220ENST00000618606 SMPD1P17405 629 aa8.79□□□□□ -1
TARDBP-220ENST00000618606 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
TARDBP-220ENST00000618606 RBM26Q5T8P6 1007 aaKnown RBP8.77□□□□□ -1.01
TARDBP-220ENST00000618606 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
TARDBP-220ENST00000618606 GPR37O15354 613 aa8.76□□□□□ -1.01
TARDBP-220ENST00000618606 TRIM32Q13049 653 aa8.76□□□□□ -1.01
TARDBP-220ENST00000618606 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
TARDBP-220ENST00000618606 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-220ENST00000618606 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
TARDBP-220ENST00000618606 MMP16P51512 607 aa8.75□□□□□ -1.01
TARDBP-220ENST00000618606 TRIM47Q96LD4 638 aa8.75□□□□□ -1.01
TARDBP-220ENST00000618606 SENP2Q9HC62 589 aa8.75□□□□□ -1.01
TARDBP-220ENST00000618606 TERTO14746 1132 aaKnown RBP8.74□□□□□ -1.01
TARDBP-220ENST00000618606 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
TARDBP-220ENST00000618606 SMYD5Q6GMV2 418 aa8.74□□□□□ -1.01
TARDBP-220ENST00000618606 NLRP7Q8WX94 980 aa8.74□□□□□ -1.01
TARDBP-220ENST00000618606 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
TARDBP-220ENST00000618606 Q3C1V9 767 aa8.73□□□□□ -1.01
TARDBP-220ENST00000618606 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
TARDBP-220ENST00000618606 J3QL48 77 aa8.72□□□□□ -1.01
TARDBP-220ENST00000618606 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
TARDBP-220ENST00000618606 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
TARDBP-220ENST00000618606 KIFC2Q96AC6 838 aa8.71□□□□□ -1.02
TARDBP-220ENST00000618606 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
TARDBP-220ENST00000618606 HPS1Q92902 700 aa8.69□□□□□ -1.02
TARDBP-220ENST00000618606 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
TARDBP-220ENST00000618606 CD46P15529 392 aa8.67□□□□□ -1.02
TARDBP-220ENST00000618606 WNT7BP56706 349 aa8.66□□□□□ -1.02
TARDBP-220ENST00000618606 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
TARDBP-220ENST00000618606 SKOR1P84550 965 aa8.65□□□□□ -1.02
TARDBP-220ENST00000618606 KDM4AO75164 1064 aa8.63□□□□□ -1.03
TARDBP-220ENST00000618606 USP46P62068 366 aa8.62□□□□□ -1.03
TARDBP-220ENST00000618606 CCDC24Q8N4L8 307 aa8.62□□□□□ -1.03
TARDBP-220ENST00000618606 SLC16A10Q8TF71 515 aa8.62□□□□□ -1.03
TARDBP-220ENST00000618606 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
TARDBP-220ENST00000618606 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
TARDBP-220ENST00000618606 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
TARDBP-220ENST00000618606 NPAS3Q8IXF0 933 aa8.6□□□□□ -1.03
TARDBP-220ENST00000618606 ALDH1A1P00352 501 aa8.59□□□□□ -1.03
TARDBP-220ENST00000618606 SIAH2O43255 324 aa8.58□□□□□ -1.04
TARDBP-220ENST00000618606 JUNDP17535 347 aa8.57□□□□□ -1.04
TARDBP-220ENST00000618606 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-220ENST00000618606 HLA-CQ95604 372 aa8.57□□□□□ -1.04
TARDBP-220ENST00000618606 HOXA2O43364 376 aa8.56□□□□□ -1.04
TARDBP-220ENST00000618606 GMPRP36959 345 aa8.56□□□□□ -1.04
TARDBP-220ENST00000618606 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
TARDBP-220ENST00000618606 IRF7Q92985 503 aa8.56□□□□□ -1.04
TARDBP-220ENST00000618606 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
TARDBP-220ENST00000618606 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
TARDBP-220ENST00000618606 KDM2AQ9Y2K7 1162 aa8.55□□□□□ -1.04
TARDBP-220ENST00000618606 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-220ENST00000618606 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
TARDBP-220ENST00000618606 BMP1P13497 986 aa8.53□□□□□ -1.04
TARDBP-220ENST00000618606 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
TARDBP-220ENST00000618606 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
TARDBP-220ENST00000618606 H3BM21 787 aa8.52□□□□□ -1.05
TARDBP-220ENST00000618606 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-220ENST00000618606 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-220ENST00000618606 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
TARDBP-220ENST00000618606 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
TARDBP-220ENST00000618606 IRF6O14896 467 aa8.51□□□□□ -1.05
TARDBP-220ENST00000618606 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
TARDBP-220ENST00000618606 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
TARDBP-220ENST00000618606 SH3BP2P78314 561 aa8.49□□□□□ -1.05
TARDBP-220ENST00000618606 VEGFBP49765 207 aa8.48□□□□□ -1.05
TARDBP-220ENST00000618606 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
TARDBP-220ENST00000618606 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-220ENST00000618606 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
TARDBP-220ENST00000618606 ZFP42Q96MM3 310 aa8.47□□□□□ -1.05
TARDBP-220ENST00000618606 KRTAP4-6Q9BYQ5 205 aa8.47□□□□□ -1.05
TARDBP-220ENST00000618606 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-220ENST00000618606 CCNYL3P0C7X3 344 aa8.46□□□□□ -1.06
TARDBP-220ENST00000618606 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
TARDBP-220ENST00000618606 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
TARDBP-220ENST00000618606 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
TARDBP-220ENST00000618606 MPNDQ8N594 471 aa8.45□□□□□ -1.06
TARDBP-220ENST00000618606 MS4A1P11836 297 aa8.44□□□□□ -1.06
TARDBP-220ENST00000618606 CLCN1P35523 988 aa8.44□□□□□ -1.06
TARDBP-220ENST00000618606 PTPRNQ16849 979 aa8.44□□□□□ -1.06
TARDBP-220ENST00000618606 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
TARDBP-220ENST00000618606 PLEKHG3A1L390 1219 aa8.43□□□□□ -1.06
TARDBP-220ENST00000618606 FDX1P10109 184 aa8.43□□□□□ -1.06
TARDBP-220ENST00000618606 UNC93B1Q9H1C4 597 aa8.43□□□□□ -1.06
TARDBP-220ENST00000618606 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
TARDBP-220ENST00000618606 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
TARDBP-220ENST00000618606 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
TARDBP-220ENST00000618606 CCDC102AQ96A19 550 aa8.42□□□□□ -1.06
TARDBP-220ENST00000618606 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
TARDBP-220ENST00000618606 C6orf229H3BNL8 230 aa8.41□□□□□ -1.06
TARDBP-220ENST00000618606 VSIG8P0DPA2 414 aa8.41□□□□□ -1.06
TARDBP-220ENST00000618606 SCARF1Q14162 830 aa8.41□□□□□ -1.06
TARDBP-220ENST00000618606 BAP1Q92560 729 aa8.41□□□□□ -1.06
TARDBP-220ENST00000618606 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
TARDBP-220ENST00000618606 NNTQ13423 1086 aa8.4□□□□□ -1.06
TARDBP-220ENST00000618606 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
TARDBP-220ENST00000618606 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
TARDBP-220ENST00000618606 ADH1CP00326 375 aa8.38□□□□□ -1.07
TARDBP-220ENST00000618606 TIMP2P16035 220 aa8.38□□□□□ -1.07
TARDBP-220ENST00000618606 PURBQ96QR8 312 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms