RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 RBM33Q96EV2 1170 aaKnown RBP22.51■■□□□ 1.19
SNAP47-213ENST00000617596 KNDC1Q76NI1 1749 aa22.5■■□□□ 1.19
SNAP47-213ENST00000617596 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
SNAP47-213ENST00000617596 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
SNAP47-213ENST00000617596 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
SNAP47-213ENST00000617596 TULP4Q9NRJ4 1543 aa22.49■■□□□ 1.19
SNAP47-213ENST00000617596 SIRT1Q96EB6 747 aa22.49■■□□□ 1.19
SNAP47-213ENST00000617596 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
SNAP47-213ENST00000617596 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
SNAP47-213ENST00000617596 CDCA8Q53HL2 280 aa22.48■■□□□ 1.19
SNAP47-213ENST00000617596 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
SNAP47-213ENST00000617596 XRN1Q8IZH2 1706 aaKnown RBP22.47■■□□□ 1.19
SNAP47-213ENST00000617596 SRPK2P78362 688 aaKnown RBP22.47■■□□□ 1.19
SNAP47-213ENST00000617596 PTCH1Q13635 1447 aa22.45■■□□□ 1.19
SNAP47-213ENST00000617596 CDK19Q9BWU1 502 aa22.45■■□□□ 1.18
SNAP47-213ENST00000617596 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.18
SNAP47-213ENST00000617596 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.42■■□□□ 1.18
SNAP47-213ENST00000617596 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
SNAP47-213ENST00000617596 MIER1Q8N108 512 aa22.42■■□□□ 1.18
SNAP47-213ENST00000617596 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
SNAP47-213ENST00000617596 PANK3Q9H999 370 aa22.41■■□□□ 1.18
SNAP47-213ENST00000617596 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
SNAP47-213ENST00000617596 NUTM2FA1L443 756 aa22.4■■□□□ 1.18
SNAP47-213ENST00000617596 SLC12A5Q9H2X9 1139 aa22.4■■□□□ 1.18
SNAP47-213ENST00000617596 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
SNAP47-213ENST00000617596 MYOM1P52179 1685 aa22.36■■□□□ 1.17
SNAP47-213ENST00000617596 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
SNAP47-213ENST00000617596 ZNF335Q9H4Z2 1342 aaPredicted RBP22.35■■□□□ 1.17
SNAP47-213ENST00000617596 C14orf37Q86TY3 774 aa22.34■■□□□ 1.17
SNAP47-213ENST00000617596 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
SNAP47-213ENST00000617596 PUS7Q96PZ0 661 aaKnown RBP22.33■■□□□ 1.17
SNAP47-213ENST00000617596 CABP1Q9NZU7 370 aa22.33■■□□□ 1.16
SNAP47-213ENST00000617596 PRR36Q9H6K5 1346 aa22.33■■□□□ 1.16
SNAP47-213ENST00000617596 PER1O15534 1290 aaPredicted RBP22.32■■□□□ 1.16
SNAP47-213ENST00000617596 NUDT16Q96DE0 195 aaKnown RBP22.32■■□□□ 1.16
SNAP47-213ENST00000617596 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
SNAP47-213ENST00000617596 ADGRB2O60241 1585 aa22.31■■□□□ 1.16
SNAP47-213ENST00000617596 ANP32CO43423 234 aa22.31■■□□□ 1.16
SNAP47-213ENST00000617596 CARD14Q9BXL6 1004 aa22.3■■□□□ 1.16
SNAP47-213ENST00000617596 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
SNAP47-213ENST00000617596 NKTRP30414 1462 aaKnown RBP22.29■■□□□ 1.16
SNAP47-213ENST00000617596 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
SNAP47-213ENST00000617596 NALCNQ8IZF0 1738 aa22.28■■□□□ 1.16
SNAP47-213ENST00000617596 ATP7BP35670 1465 aa22.27■■□□□ 1.16
SNAP47-213ENST00000617596 CCDC61Q9Y6R9 512 aa22.27■■□□□ 1.16
SNAP47-213ENST00000617596 ADGRL3Q9HAR2 1447 aa22.26■■□□□ 1.15
SNAP47-213ENST00000617596 PPIP5K1Q6PFW1 1433 aa22.26■■□□□ 1.15
SNAP47-213ENST00000617596 CC2D1BQ5T0F9 858 aaKnown RBP22.25■■□□□ 1.15
SNAP47-213ENST00000617596 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
SNAP47-213ENST00000617596 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
SNAP47-213ENST00000617596 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
SNAP47-213ENST00000617596 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
SNAP47-213ENST00000617596 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
SNAP47-213ENST00000617596 NINLQ9Y2I6 1382 aa22.22■■□□□ 1.15
SNAP47-213ENST00000617596 NSD3Q9BZ95 1437 aa22.22■■□□□ 1.15
SNAP47-213ENST00000617596 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
SNAP47-213ENST00000617596 USP32Q8NFA0 1604 aa22.21■■□□□ 1.15
SNAP47-213ENST00000617596 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
SNAP47-213ENST00000617596 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
SNAP47-213ENST00000617596 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.14
SNAP47-213ENST00000617596 CDC42BPGQ6DT37 1551 aa22.2■■□□□ 1.14
SNAP47-213ENST00000617596 LRRC7Q96NW7 1537 aa22.19■■□□□ 1.14
SNAP47-213ENST00000617596 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
SNAP47-213ENST00000617596 FMN2Q9NZ56 1722 aa22.18■■□□□ 1.14
SNAP47-213ENST00000617596 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
SNAP47-213ENST00000617596 ACEP12821 1306 aa22.17■■□□□ 1.14
SNAP47-213ENST00000617596 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
SNAP47-213ENST00000617596 PLEKHG3A1L390 1219 aa22.15■■□□□ 1.14
SNAP47-213ENST00000617596 CPSF1Q10570 1443 aaKnown RBP22.15■■□□□ 1.14
SNAP47-213ENST00000617596 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
SNAP47-213ENST00000617596 TOPAZ1Q8N9V7 1692 aa22.14■■□□□ 1.14
SNAP47-213ENST00000617596 ATF3P18847 181 aa22.14■■□□□ 1.14
SNAP47-213ENST00000617596 ESCO1Q5FWF5 840 aa22.14■■□□□ 1.14
SNAP47-213ENST00000617596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.14
SNAP47-213ENST00000617596 ORAI2Q96SN7 254 aa22.14■■□□□ 1.14
SNAP47-213ENST00000617596 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
SNAP47-213ENST00000617596 NGDNQ8NEJ9 315 aaKnown RBP22.13■■□□□ 1.13
SNAP47-213ENST00000617596 NCOA3Q9Y6Q9 1424 aa22.13■■□□□ 1.13
SNAP47-213ENST00000617596 XIRP1Q702N8 1843 aaKnown RBP22.13■■□□□ 1.13
SNAP47-213ENST00000617596 MSH6P52701 1360 aa22.12■■□□□ 1.13
SNAP47-213ENST00000617596 CGNL1Q0VF96 1302 aa22.11■■□□□ 1.13
SNAP47-213ENST00000617596 PARD3Q8TEW0 1356 aa22.1■■□□□ 1.13
SNAP47-213ENST00000617596 PHF8Q9UPP1 1060 aa22.1■■□□□ 1.13
SNAP47-213ENST00000617596 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
SNAP47-213ENST00000617596 RALBP1Q15311 655 aa22.09■■□□□ 1.13
SNAP47-213ENST00000617596 FYB1O15117 783 aa22.08■■□□□ 1.13
SNAP47-213ENST00000617596 CADPS2Q86UW7 1296 aa22.08■■□□□ 1.13
SNAP47-213ENST00000617596 ZNF692Q9BU19 519 aaPredicted RBP22.08■■□□□ 1.13
SNAP47-213ENST00000617596 C1orf167Q5SNV9 1468 aa22.08■■□□□ 1.12
SNAP47-213ENST00000617596 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.12
SNAP47-213ENST00000617596 MST1RQ04912 1400 aa22.08■■□□□ 1.12
SNAP47-213ENST00000617596 ITSN1Q15811 1721 aa22.07■■□□□ 1.12
SNAP47-213ENST00000617596 POLR3AO14802 1390 aaPredicted RBP22.07■■□□□ 1.12
SNAP47-213ENST00000617596 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
SNAP47-213ENST00000617596 DCCP43146 1447 aa22.06■■□□□ 1.12
SNAP47-213ENST00000617596 NME9Q86XW9 330 aa22.06■■□□□ 1.12
SNAP47-213ENST00000617596 ZRANB1Q9UGI0 708 aa22.06■■□□□ 1.12
SNAP47-213ENST00000617596 USP6P35125 1406 aa22.05■■□□□ 1.12
SNAP47-213ENST00000617596 EDC4Q6P2E9 1401 aaKnown RBP22.05■■□□□ 1.12
SNAP47-213ENST00000617596 LTBP4Q8N2S1 1624 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms