RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 GMPRP36959 345 aa9.93□□□□□ -0.82
CUL3-216ENST00000617432 FUT2Q10981 343 aa9.93□□□□□ -0.82
CUL3-216ENST00000617432 MSS51Q4VC12 460 aa9.93□□□□□ -0.82
CUL3-216ENST00000617432 BRICD5Q6PL45 260 aa9.93□□□□□ -0.82
CUL3-216ENST00000617432 PRDM9Q9NQV7 894 aa9.93□□□□□ -0.82
CUL3-216ENST00000617432 TRIM32Q13049 653 aa9.92□□□□□ -0.82
CUL3-216ENST00000617432 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
CUL3-216ENST00000617432 HPS1Q92902 700 aa9.92□□□□□ -0.82
CUL3-216ENST00000617432 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
CUL3-216ENST00000617432 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
CUL3-216ENST00000617432 IRF7Q92985 503 aa9.91□□□□□ -0.82
CUL3-216ENST00000617432 METTL3Q86U44 580 aaKnown RBP9.9□□□□□ -0.82
CUL3-216ENST00000617432 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.83
CUL3-216ENST00000617432 FECHP22830 423 aa9.88□□□□□ -0.83
CUL3-216ENST00000617432 SUZ12Q15022 739 aaKnown RBP9.88□□□□□ -0.83
CUL3-216ENST00000617432 GCGRP47871 477 aa9.87□□□□□ -0.83
CUL3-216ENST00000617432 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
CUL3-216ENST00000617432 MMP16P51512 607 aa9.84□□□□□ -0.83
CUL3-216ENST00000617432 H3BM21 787 aa9.83□□□□□ -0.84
CUL3-216ENST00000617432 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
CUL3-216ENST00000617432 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
CUL3-216ENST00000617432 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
CUL3-216ENST00000617432 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
CUL3-216ENST00000617432 HIC1Q14526 733 aa9.82□□□□□ -0.84
CUL3-216ENST00000617432 RC3H1Q5TC82 1133 aaKnown RBP9.82□□□□□ -0.84
CUL3-216ENST00000617432 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
CUL3-216ENST00000617432 Q3C1V9 767 aa9.81□□□□□ -0.84
CUL3-216ENST00000617432 WNT7BP56706 349 aa9.8□□□□□ -0.84
CUL3-216ENST00000617432 VEGFBP49765 207 aa9.78□□□□□ -0.84
CUL3-216ENST00000617432 TRIM46Q7Z4K8 759 aa9.78□□□□□ -0.84
CUL3-216ENST00000617432 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
CUL3-216ENST00000617432 ERBB4Q15303 1308 aa9.77□□□□□ -0.85
CUL3-216ENST00000617432 ALDH1A1P00352 501 aa9.77□□□□□ -0.85
CUL3-216ENST00000617432 SKOR1P84550 965 aa9.77□□□□□ -0.85
CUL3-216ENST00000617432 DXOO77932 396 aaKnown RBP9.76□□□□□ -0.85
CUL3-216ENST00000617432 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
CUL3-216ENST00000617432 BMP1P13497 986 aa9.74□□□□□ -0.85
CUL3-216ENST00000617432 USB1Q9BQ65 265 aaKnown RBP9.74□□□□□ -0.85
CUL3-216ENST00000617432 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
CUL3-216ENST00000617432 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
CUL3-216ENST00000617432 GNPATO15228 680 aa9.72□□□□□ -0.85
CUL3-216ENST00000617432 SIAH2O43255 324 aa9.7□□□□□ -0.86
CUL3-216ENST00000617432 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
CUL3-216ENST00000617432 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
CUL3-216ENST00000617432 KCTD17Q8N5Z5 321 aa9.69□□□□□ -0.86
CUL3-216ENST00000617432 VSIG8P0DPA2 414 aa9.67□□□□□ -0.86
CUL3-216ENST00000617432 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
CUL3-216ENST00000617432 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
CUL3-216ENST00000617432 SEMA3EO15041 775 aa9.65□□□□□ -0.86
CUL3-216ENST00000617432 GSK3AP49840 483 aa9.65□□□□□ -0.87
CUL3-216ENST00000617432 PHOX2BQ99453 314 aa9.65□□□□□ -0.87
CUL3-216ENST00000617432 TMEM151AQ8N4L1 468 aa9.63□□□□□ -0.87
CUL3-216ENST00000617432 KDM4AO75164 1064 aa9.62□□□□□ -0.87
CUL3-216ENST00000617432 CD46P15529 392 aa9.62□□□□□ -0.87
CUL3-216ENST00000617432 JUNDP17535 347 aa9.61□□□□□ -0.87
CUL3-216ENST00000617432 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
CUL3-216ENST00000617432 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
CUL3-216ENST00000617432 GPR37O15354 613 aa9.6□□□□□ -0.87
CUL3-216ENST00000617432 USP46P62068 366 aa9.6□□□□□ -0.87
CUL3-216ENST00000617432 SCARF1Q14162 830 aa9.59□□□□□ -0.87
CUL3-216ENST00000617432 GDF11O95390 407 aa9.58□□□□□ -0.88
CUL3-216ENST00000617432 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
CUL3-216ENST00000617432 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
CUL3-216ENST00000617432 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
CUL3-216ENST00000617432 RASSF7Q02833 373 aa9.56□□□□□ -0.88
CUL3-216ENST00000617432 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
CUL3-216ENST00000617432 SH3BP2P78314 561 aa9.56□□□□□ -0.88
CUL3-216ENST00000617432 PLEKHG3A1L390 1219 aa9.55□□□□□ -0.88
CUL3-216ENST00000617432 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
CUL3-216ENST00000617432 HLA-CQ95604 372 aa9.55□□□□□ -0.88
CUL3-216ENST00000617432 TSHZ2Q9NRE2 1034 aa9.55□□□□□ -0.88
CUL3-216ENST00000617432 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
CUL3-216ENST00000617432 MPNDQ8N594 471 aa9.54□□□□□ -0.88
CUL3-216ENST00000617432 PURBQ96QR8 312 aaKnown RBP9.54□□□□□ -0.88
CUL3-216ENST00000617432 RB1CC1Q8TDY2 1594 aa9.52□□□□□ -0.88
CUL3-216ENST00000617432 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
CUL3-216ENST00000617432 HOXA2O43364 376 aa9.52□□□□□ -0.89
CUL3-216ENST00000617432 NNTQ13423 1086 aa9.52□□□□□ -0.89
CUL3-216ENST00000617432 RETREG3Q86VR2 466 aa9.5□□□□□ -0.89
CUL3-216ENST00000617432 TLL2Q9Y6L7 1015 aa9.5□□□□□ -0.89
CUL3-216ENST00000617432 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
CUL3-216ENST00000617432 ADH1CP00326 375 aa9.49□□□□□ -0.89
CUL3-216ENST00000617432 TIMP2P16035 220 aa9.49□□□□□ -0.89
CUL3-216ENST00000617432 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
CUL3-216ENST00000617432 WDR4P57081 412 aaKnown RBP9.48□□□□□ -0.89
CUL3-216ENST00000617432 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
CUL3-216ENST00000617432 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
CUL3-216ENST00000617432 MAN1A2O60476 641 aa9.48□□□□□ -0.89
CUL3-216ENST00000617432 CCNYL3P0C7X3 344 aa9.48□□□□□ -0.89
CUL3-216ENST00000617432 NACADO15069 1562 aa9.47□□□□□ -0.89
CUL3-216ENST00000617432 KLF16Q9BXK1 252 aaPredicted RBP9.47□□□□□ -0.89
CUL3-216ENST00000617432 IGHA1P01876 353 aa9.46□□□□□ -0.9
CUL3-216ENST00000617432 GUCA2AQ02747 115 aa9.46□□□□□ -0.9
CUL3-216ENST00000617432 MS4A1P11836 297 aa9.45□□□□□ -0.9
CUL3-216ENST00000617432 BAP1Q92560 729 aa9.45□□□□□ -0.9
CUL3-216ENST00000617432 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
CUL3-216ENST00000617432 EVA1BQ9NVM1 165 aa9.44□□□□□ -0.9
CUL3-216ENST00000617432 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
CUL3-216ENST00000617432 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
CUL3-216ENST00000617432 ZCCHC6Q5VYS8 1495 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms