RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
SPTSSB-204ENST00000617024 ASXL1Q8IXJ9 1541 aa23.3■■□□□ 1.32
SPTSSB-204ENST00000617024 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
SPTSSB-204ENST00000617024 ADGRB1O14514 1584 aa23.29■■□□□ 1.32
SPTSSB-204ENST00000617024 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
SPTSSB-204ENST00000617024 NCOA3Q9Y6Q9 1424 aa23.28■■□□□ 1.32
SPTSSB-204ENST00000617024 TRPM1Q7Z4N2 1603 aa23.28■■□□□ 1.32
SPTSSB-204ENST00000617024 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
SPTSSB-204ENST00000617024 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
SPTSSB-204ENST00000617024 WAPLQ7Z5K2 1190 aa23.26■■□□□ 1.31
SPTSSB-204ENST00000617024 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
SPTSSB-204ENST00000617024 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
SPTSSB-204ENST00000617024 POGKQ9P215 609 aa23.25■■□□□ 1.31
SPTSSB-204ENST00000617024 TECPR2O15040 1411 aa23.25■■□□□ 1.31
SPTSSB-204ENST00000617024 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
SPTSSB-204ENST00000617024 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
SPTSSB-204ENST00000617024 ZNF772Q68DY9 489 aaPredicted RBP23.24■■□□□ 1.31
SPTSSB-204ENST00000617024 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
SPTSSB-204ENST00000617024 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
SPTSSB-204ENST00000617024 GPRASP1Q5JY77 1395 aa23.23■■□□□ 1.31
SPTSSB-204ENST00000617024 KNDC1Q76NI1 1749 aa23.21■■□□□ 1.31
SPTSSB-204ENST00000617024 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
SPTSSB-204ENST00000617024 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
SPTSSB-204ENST00000617024 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
SPTSSB-204ENST00000617024 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
SPTSSB-204ENST00000617024 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
SPTSSB-204ENST00000617024 BRINP3Q76B58 766 aa23.17■■□□□ 1.3
SPTSSB-204ENST00000617024 ATF3P18847 181 aa23.16■■□□□ 1.3
SPTSSB-204ENST00000617024 CDK12Q9NYV4 1490 aaPredicted RBP23.16■■□□□ 1.3
SPTSSB-204ENST00000617024 RXRBP28702 533 aa23.15■■□□□ 1.3
SPTSSB-204ENST00000617024 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
SPTSSB-204ENST00000617024 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.29
SPTSSB-204ENST00000617024 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
SPTSSB-204ENST00000617024 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
SPTSSB-204ENST00000617024 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
SPTSSB-204ENST00000617024 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
SPTSSB-204ENST00000617024 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
SPTSSB-204ENST00000617024 ADGRL3Q9HAR2 1447 aa23.12■■□□□ 1.29
SPTSSB-204ENST00000617024 AFF2P51816 1311 aa23.11■■□□□ 1.29
SPTSSB-204ENST00000617024 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
SPTSSB-204ENST00000617024 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
SPTSSB-204ENST00000617024 MST1RQ04912 1400 aa23.09■■□□□ 1.29
SPTSSB-204ENST00000617024 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
SPTSSB-204ENST00000617024 DCCP43146 1447 aa23.08■■□□□ 1.29
SPTSSB-204ENST00000617024 RGS12O14924 1447 aa23.08■■□□□ 1.28
SPTSSB-204ENST00000617024 USP47Q96K76 1375 aa23.06■■□□□ 1.28
SPTSSB-204ENST00000617024 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
SPTSSB-204ENST00000617024 NALCNQ8IZF0 1738 aa23.05■■□□□ 1.28
SPTSSB-204ENST00000617024 WASLO00401 505 aaPredicted RBP23.04■■□□□ 1.28
SPTSSB-204ENST00000617024 EIF4G2P78344 907 aaKnown RBP eCLIP23.04■■□□□ 1.28
SPTSSB-204ENST00000617024 DDX17Q92841 729 aaKnown RBP23.04■■□□□ 1.28
SPTSSB-204ENST00000617024 EP400Q96L91 3159 aa23.03■■□□□ 1.28
SPTSSB-204ENST00000617024 SLC24A1O60721 1099 aa23.03■■□□□ 1.28
SPTSSB-204ENST00000617024 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
SPTSSB-204ENST00000617024 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SPTSSB-204ENST00000617024 NUTM2FA1L443 756 aa23■■□□□ 1.27
SPTSSB-204ENST00000617024 C8orf37Q96NL8 207 aa23■■□□□ 1.27
SPTSSB-204ENST00000617024 EVC2Q86UK5 1308 aa23■■□□□ 1.27
SPTSSB-204ENST00000617024 QRICH2Q9H0J4 1663 aa23■■□□□ 1.27
SPTSSB-204ENST00000617024 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
SPTSSB-204ENST00000617024 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
SPTSSB-204ENST00000617024 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
SPTSSB-204ENST00000617024 RBM6P78332 1123 aaKnown RBP22.98■■□□□ 1.27
SPTSSB-204ENST00000617024 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
SPTSSB-204ENST00000617024 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
SPTSSB-204ENST00000617024 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
SPTSSB-204ENST00000617024 TESK2Q96S53 571 aa22.97■■□□□ 1.27
SPTSSB-204ENST00000617024 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
SPTSSB-204ENST00000617024 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
SPTSSB-204ENST00000617024 C1orf167Q5SNV9 1468 aa22.95■■□□□ 1.26
SPTSSB-204ENST00000617024 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
SPTSSB-204ENST00000617024 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
SPTSSB-204ENST00000617024 TMF1P82094 1093 aa22.93■■□□□ 1.26
SPTSSB-204ENST00000617024 ORAI2Q96SN7 254 aa22.93■■□□□ 1.26
SPTSSB-204ENST00000617024 FMN2Q9NZ56 1722 aa22.93■■□□□ 1.26
SPTSSB-204ENST00000617024 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
SPTSSB-204ENST00000617024 CCDC61Q9Y6R9 512 aa22.9■■□□□ 1.26
SPTSSB-204ENST00000617024 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.26
SPTSSB-204ENST00000617024 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.26
SPTSSB-204ENST00000617024 ADAMTS2O95450 1211 aa22.89■■□□□ 1.25
SPTSSB-204ENST00000617024 PUS7Q96PZ0 661 aaKnown RBP22.89■■□□□ 1.25
SPTSSB-204ENST00000617024 CDCA8Q53HL2 280 aa22.88■■□□□ 1.25
SPTSSB-204ENST00000617024 PHF8Q9UPP1 1060 aa22.88■■□□□ 1.25
SPTSSB-204ENST00000617024 NGLY1Q96IV0 654 aa22.87■■□□□ 1.25
SPTSSB-204ENST00000617024 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
SPTSSB-204ENST00000617024 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
SPTSSB-204ENST00000617024 ATAD2Q6PL18 1390 aa22.85■■□□□ 1.25
SPTSSB-204ENST00000617024 SOS2Q07890 1332 aaPredicted RBP22.84■■□□□ 1.25
SPTSSB-204ENST00000617024 USP32Q8NFA0 1604 aa22.83■■□□□ 1.25
SPTSSB-204ENST00000617024 PLEKHG3A1L390 1219 aa22.83■■□□□ 1.25
SPTSSB-204ENST00000617024 CABP1Q9NZU7 370 aa22.83■■□□□ 1.25
SPTSSB-204ENST00000617024 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 ATP7BP35670 1465 aa22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 FOXO3O43524 673 aa22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 NGDNQ8NEJ9 315 aaKnown RBP22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 USP21Q9UK80 565 aa22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 ATRNO75882 1429 aa22.82■■□□□ 1.24
SPTSSB-204ENST00000617024 PSME1Q06323 249 aa22.8■■□□□ 1.24
SPTSSB-204ENST00000617024 FNBP4Q8N3X1 1017 aaPredicted RBP22.8■■□□□ 1.24
SPTSSB-204ENST00000617024 TMC1Q8TDI8 760 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms