RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
PCDH9-206ENST00000617020 SAMD9LQ8IVG5 1584 aa10.42□□□□□ -0.74
PCDH9-206ENST00000617020 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
PCDH9-206ENST00000617020 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
PCDH9-206ENST00000617020 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
PCDH9-206ENST00000617020 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
PCDH9-206ENST00000617020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
PCDH9-206ENST00000617020 CDC42BPAQ5VT25 1732 aa10.39□□□□□ -0.75
PCDH9-206ENST00000617020 LRRIQ1Q96JM4 1722 aa10.39□□□□□ -0.75
PCDH9-206ENST00000617020 INO80Q9ULG1 1556 aaPredicted RBP10.39□□□□□ -0.75
PCDH9-206ENST00000617020 RANGAP1P46060 587 aaPredicted RBP10.38□□□□□ -0.75
PCDH9-206ENST00000617020 FAM135BQ49AJ0 1406 aa10.38□□□□□ -0.75
PCDH9-206ENST00000617020 ANKLE2Q86XL3 938 aa10.37□□□□□ -0.75
PCDH9-206ENST00000617020 UGGT1Q9NYU2 1555 aa10.37□□□□□ -0.75
PCDH9-206ENST00000617020 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
PCDH9-206ENST00000617020 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
PCDH9-206ENST00000617020 TK2O00142 265 aa10.36□□□□□ -0.75
PCDH9-206ENST00000617020 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
PCDH9-206ENST00000617020 TNRQ92752 1358 aa10.36□□□□□ -0.75
PCDH9-206ENST00000617020 LRP6O75581 1613 aa10.36□□□□□ -0.75
PCDH9-206ENST00000617020 HRO43593 1189 aa10.35□□□□□ -0.75
PCDH9-206ENST00000617020 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
PCDH9-206ENST00000617020 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
PCDH9-206ENST00000617020 SYCP2Q9BX26 1530 aa10.34□□□□□ -0.75
PCDH9-206ENST00000617020 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
PCDH9-206ENST00000617020 A2MP01023 1474 aa10.34□□□□□ -0.75
PCDH9-206ENST00000617020 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
PCDH9-206ENST00000617020 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
PCDH9-206ENST00000617020 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
PCDH9-206ENST00000617020 GGT6Q6P531 493 aa10.33□□□□□ -0.76
PCDH9-206ENST00000617020 PTCD2Q8WV60 388 aaKnown RBP10.33□□□□□ -0.76
PCDH9-206ENST00000617020 CDK12Q9NYV4 1490 aaPredicted RBP10.33□□□□□ -0.76
PCDH9-206ENST00000617020 PZPP20742 1482 aa10.32□□□□□ -0.76
PCDH9-206ENST00000617020 PPP1R37O75864 691 aa10.32□□□□□ -0.76
PCDH9-206ENST00000617020 CLIP1P30622 1438 aa10.32□□□□□ -0.76
PCDH9-206ENST00000617020 NLRP1Q9C000 1473 aa10.31□□□□□ -0.76
PCDH9-206ENST00000617020 JCADQ9P266 1359 aa10.31□□□□□ -0.76
PCDH9-206ENST00000617020 PSEN2P49810 448 aa10.31□□□□□ -0.76
PCDH9-206ENST00000617020 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
PCDH9-206ENST00000617020 FBXO31Q5XUX0 539 aaPredicted RBP10.3□□□□□ -0.76
PCDH9-206ENST00000617020 ZNF772Q68DY9 489 aaPredicted RBP10.3□□□□□ -0.76
PCDH9-206ENST00000617020 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
PCDH9-206ENST00000617020 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
PCDH9-206ENST00000617020 KDM5DQ9BY66 1539 aa10.29□□□□□ -0.76
PCDH9-206ENST00000617020 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-206ENST00000617020 UBR1Q8IWV7 1749 aa10.29□□□□□ -0.76
PCDH9-206ENST00000617020 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
PCDH9-206ENST00000617020 EP400Q96L91 3159 aa10.28□□□□□ -0.76
PCDH9-206ENST00000617020 RGS12O14924 1447 aa10.28□□□□□ -0.76
PCDH9-206ENST00000617020 RGL2O15211 777 aa10.28□□□□□ -0.76
PCDH9-206ENST00000617020 PPP4R3BQ5MIZ7 849 aa10.28□□□□□ -0.76
PCDH9-206ENST00000617020 LRP5O75197 1615 aa10.27□□□□□ -0.77
PCDH9-206ENST00000617020 RXRBP28702 533 aa10.27□□□□□ -0.77
PCDH9-206ENST00000617020 KCTD12Q96CX2 325 aaKnown RBP10.27□□□□□ -0.77
PCDH9-206ENST00000617020 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
PCDH9-206ENST00000617020 FOXK1P85037 733 aa10.26□□□□□ -0.77
PCDH9-206ENST00000617020 MEX3CQ5U5Q3 659 aaKnown RBP10.26□□□□□ -0.77
PCDH9-206ENST00000617020 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
PCDH9-206ENST00000617020 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
PCDH9-206ENST00000617020 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
PCDH9-206ENST00000617020 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
PCDH9-206ENST00000617020 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
PCDH9-206ENST00000617020 TMEM94Q12767 1356 aa10.25□□□□□ -0.77
PCDH9-206ENST00000617020 SCAF11Q99590 1463 aaKnown RBP10.24□□□□□ -0.77
PCDH9-206ENST00000617020 SPATA31A6Q5VVP1 1343 aa10.23□□□□□ -0.77
PCDH9-206ENST00000617020 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
PCDH9-206ENST00000617020 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
PCDH9-206ENST00000617020 FMN1Q68DA7 1419 aa10.22□□□□□ -0.77
PCDH9-206ENST00000617020 FGD6Q6ZV73 1430 aa10.22□□□□□ -0.77
PCDH9-206ENST00000617020 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
PCDH9-206ENST00000617020 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
PCDH9-206ENST00000617020 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
PCDH9-206ENST00000617020 HNRNPMP52272 730 aaKnown RBP eCLIP10.2□□□□□ -0.78
PCDH9-206ENST00000617020 DSG2Q14126 1118 aa10.2□□□□□ -0.78
PCDH9-206ENST00000617020 AHDC1Q5TGY3 1603 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
PCDH9-206ENST00000617020 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 TBC1D12O60347 775 aa10.19□□□□□ -0.78
PCDH9-206ENST00000617020 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-206ENST00000617020 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
PCDH9-206ENST00000617020 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
PCDH9-206ENST00000617020 SLIT1O75093 1534 aa10.18□□□□□ -0.78
PCDH9-206ENST00000617020 ARHGAP23Q9P227 1491 aa10.18□□□□□ -0.78
PCDH9-206ENST00000617020 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
PCDH9-206ENST00000617020 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
PCDH9-206ENST00000617020 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
PCDH9-206ENST00000617020 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
PCDH9-206ENST00000617020 AFF2P51816 1311 aa10.17□□□□□ -0.78
PCDH9-206ENST00000617020 PLEKHH2Q8IVE3 1493 aa10.17□□□□□ -0.78
PCDH9-206ENST00000617020 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
PCDH9-206ENST00000617020 GPATCH8Q9UKJ3 1502 aaKnown RBP10.16□□□□□ -0.78
PCDH9-206ENST00000617020 NKTRP30414 1462 aaKnown RBP10.16□□□□□ -0.78
PCDH9-206ENST00000617020 ERVK-7P63135 1459 aa10.16□□□□□ -0.78
PCDH9-206ENST00000617020 CEP152O94986 1710 aa10.16□□□□□ -0.78
PCDH9-206ENST00000617020 MSH6P52701 1360 aa10.15□□□□□ -0.78
PCDH9-206ENST00000617020 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.78
PCDH9-206ENST00000617020 LTKP29376 864 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms