RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 PANK1Q8TE04 598 aa19.88■□□□□ 0.77
GPN1-212ENST00000616939 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
GPN1-212ENST00000616939 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
GPN1-212ENST00000616939 RARSP54136 660 aaKnown RBP19.87■□□□□ 0.77
GPN1-212ENST00000616939 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
GPN1-212ENST00000616939 TRAPPC8Q9Y2L5 1435 aa19.87■□□□□ 0.77
GPN1-212ENST00000616939 ZCCHC11Q5TAX3 1644 aaKnown RBP19.87■□□□□ 0.77
GPN1-212ENST00000616939 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
GPN1-212ENST00000616939 EFCAB2Q5VUJ9 269 aa19.86■□□□□ 0.77
GPN1-212ENST00000616939 TBC1D2Q9BYX2 928 aa19.86■□□□□ 0.77
GPN1-212ENST00000616939 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
GPN1-212ENST00000616939 RWDD1Q9H446 243 aaPredicted RBP19.85■□□□□ 0.77
GPN1-212ENST00000616939 CARD14Q9BXL6 1004 aa19.84■□□□□ 0.77
GPN1-212ENST00000616939 SLKQ9H2G2 1235 aaPredicted RBP19.84■□□□□ 0.77
GPN1-212ENST00000616939 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
GPN1-212ENST00000616939 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.77
GPN1-212ENST00000616939 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.77
GPN1-212ENST00000616939 MROH2AA6NES4 1674 aa19.83■□□□□ 0.77
GPN1-212ENST00000616939 MROH1Q8NDA8 1641 aa19.82■□□□□ 0.76
GPN1-212ENST00000616939 EIF5BO60841 1220 aaKnown RBP19.82■□□□□ 0.76
GPN1-212ENST00000616939 PCDHB15Q9Y5E8 787 aa19.82■□□□□ 0.76
GPN1-212ENST00000616939 QRICH2Q9H0J4 1663 aa19.82■□□□□ 0.76
GPN1-212ENST00000616939 MCM4P33991 863 aa19.81■□□□□ 0.76
GPN1-212ENST00000616939 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
GPN1-212ENST00000616939 GOLGA6L3A6NEY3 463 aa19.81■□□□□ 0.76
GPN1-212ENST00000616939 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
GPN1-212ENST00000616939 CT47B1P0C2W7 299 aaPredicted RBP19.8■□□□□ 0.76
GPN1-212ENST00000616939 CHMP5Q9NZZ3 219 aa19.8■□□□□ 0.76
GPN1-212ENST00000616939 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
GPN1-212ENST00000616939 EFCAB6Q5THR3 1501 aa19.79■□□□□ 0.76
GPN1-212ENST00000616939 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
GPN1-212ENST00000616939 SPAG9O60271 1321 aaKnown RBP19.78■□□□□ 0.76
GPN1-212ENST00000616939 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
GPN1-212ENST00000616939 ADGRB3O60242 1522 aa19.77■□□□□ 0.76
GPN1-212ENST00000616939 CLCN1P35523 988 aa19.77■□□□□ 0.76
GPN1-212ENST00000616939 RLBP1P12271 317 aa19.76■□□□□ 0.75
GPN1-212ENST00000616939 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
GPN1-212ENST00000616939 PPLO60437 1756 aa19.76■□□□□ 0.75
GPN1-212ENST00000616939 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
GPN1-212ENST00000616939 FANCAO15360 1455 aa19.76■□□□□ 0.75
GPN1-212ENST00000616939 MVPQ14764 893 aaKnown RBP19.76■□□□□ 0.75
GPN1-212ENST00000616939 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
GPN1-212ENST00000616939 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
GPN1-212ENST00000616939 NSD2O96028 1365 aa19.75■□□□□ 0.75
GPN1-212ENST00000616939 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
GPN1-212ENST00000616939 MRE11P49959 708 aa19.73■□□□□ 0.75
GPN1-212ENST00000616939 HDAC1Q13547 482 aaPredicted RBP19.73■□□□□ 0.75
GPN1-212ENST00000616939 DDX11L8A8MPP1 907 aa19.72■□□□□ 0.75
GPN1-212ENST00000616939 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
GPN1-212ENST00000616939 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
GPN1-212ENST00000616939 C22orf23Q9BZE7 217 aa19.72■□□□□ 0.75
GPN1-212ENST00000616939 PPRC1Q5VV67 1664 aaKnown RBP19.71■□□□□ 0.75
GPN1-212ENST00000616939 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
GPN1-212ENST00000616939 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
GPN1-212ENST00000616939 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
GPN1-212ENST00000616939 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
GPN1-212ENST00000616939 UGGT1Q9NYU2 1555 aa19.7■□□□□ 0.74
GPN1-212ENST00000616939 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
GPN1-212ENST00000616939 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
GPN1-212ENST00000616939 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
GPN1-212ENST00000616939 TRAK2O60296 914 aa19.69■□□□□ 0.74
GPN1-212ENST00000616939 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
GPN1-212ENST00000616939 DDIT3P35638 169 aa19.68■□□□□ 0.74
GPN1-212ENST00000616939 SNX21Q969T3 373 aa19.68■□□□□ 0.74
GPN1-212ENST00000616939 CIZ1Q9ULV3 898 aaPredicted RBP19.68■□□□□ 0.74
GPN1-212ENST00000616939 ANKRD26Q9UPS8 1709 aa19.67■□□□□ 0.74
GPN1-212ENST00000616939 PTMSP20962 102 aa19.67■□□□□ 0.74
GPN1-212ENST00000616939 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
GPN1-212ENST00000616939 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
GPN1-212ENST00000616939 HSCBQ8IWL3 235 aa19.67■□□□□ 0.74
GPN1-212ENST00000616939 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
GPN1-212ENST00000616939 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
GPN1-212ENST00000616939 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
GPN1-212ENST00000616939 RBM25P49756 843 aaKnown RBP19.65■□□□□ 0.74
GPN1-212ENST00000616939 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
GPN1-212ENST00000616939 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
GPN1-212ENST00000616939 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.74
GPN1-212ENST00000616939 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
GPN1-212ENST00000616939 IL16Q14005 1332 aa19.63■□□□□ 0.73
GPN1-212ENST00000616939 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
GPN1-212ENST00000616939 NOS1P29475 1434 aa19.62■□□□□ 0.73
GPN1-212ENST00000616939 GLIPR1L2Q4G1C9 344 aa19.62■□□□□ 0.73
GPN1-212ENST00000616939 PANK2Q9BZ23 570 aa19.62■□□□□ 0.73
GPN1-212ENST00000616939 GRPEL1Q9HAV7 217 aa19.62■□□□□ 0.73
GPN1-212ENST00000616939 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
GPN1-212ENST00000616939 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
GPN1-212ENST00000616939 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
GPN1-212ENST00000616939 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
GPN1-212ENST00000616939 GLI2P10070 1586 aa19.6■□□□□ 0.73
GPN1-212ENST00000616939 MTHFSP49914 203 aa19.6■□□□□ 0.73
GPN1-212ENST00000616939 SKOR2Q2VWA4 1001 aaPredicted RBP19.6■□□□□ 0.73
GPN1-212ENST00000616939 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
GPN1-212ENST00000616939 KIDINS220Q9ULH0 1771 aa19.59■□□□□ 0.73
GPN1-212ENST00000616939 TULP4Q9NRJ4 1543 aa19.58■□□□□ 0.73
GPN1-212ENST00000616939 RRP9O43818 475 aaKnown RBP19.58■□□□□ 0.73
GPN1-212ENST00000616939 AFAP1Q8N556 730 aa19.58■□□□□ 0.73
GPN1-212ENST00000616939 C14orf93Q9H972 538 aaKnown RBP19.58■□□□□ 0.73
GPN1-212ENST00000616939 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.72
GPN1-212ENST00000616939 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
GPN1-212ENST00000616939 MED14O60244 1454 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms