RNA–Protein interactions for RNA: ENST00000616559.4

PTPRQ-209, Transcript of protein tyrosine phosphatase, receptor type Q, humanhuman

TSL 5 BASIC

Gene PTPRQ, Length 8,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQ-209ENST00000616559 MCCP23508 829 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 TERF1P54274 439 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 VPS37DQ86XT2 251 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 CLASRPQ8N2M8 674 aaKnown RBP2.53□□□□□ -2
PTPRQ-209ENST00000616559 RNF216Q9NWF9 866 aaPredicted RBP2.53□□□□□ -2
PTPRQ-209ENST00000616559 NF2P35240 595 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 CCAR2Q8N163 923 aaKnown RBP2.53□□□□□ -2
PTPRQ-209ENST00000616559 GPATCH3Q96I76 525 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 CCDC77Q9BR77 488 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 CACYBPQ9HB71 228 aaKnown RBP2.53□□□□□ -2
PTPRQ-209ENST00000616559 SVILO95425 2214 aa2.53□□□□□ -2
PTPRQ-209ENST00000616559 EVA1CP58658 441 aa2.53□□□□□ -2.01
PTPRQ-209ENST00000616559 MAP7D2Q96T17 732 aa2.53□□□□□ -2.01
PTPRQ-209ENST00000616559 RBM28Q9NW13 759 aaKnown RBP2.53□□□□□ -2.01
PTPRQ-209ENST00000616559 SERTAD1Q9UHV2 236 aa2.53□□□□□ -2.01
PTPRQ-209ENST00000616559 MPHOSPH10O00566 681 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 GBP2P32456 591 aaPredicted RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CCDC82Q8N4S0 544 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 FERMT1Q9BQL6 677 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 ZKSCAN5Q9Y2L8 839 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CETN3O15182 167 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 FERP16591 822 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 AKAP17AQ02040 695 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 SCG3Q8WXD2 468 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 RTF1Q92541 710 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 DNAJC13O75165 2243 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 SART1O43290 800 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 AEBP1Q8IUX7 1158 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CCDC110Q8TBZ0 833 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 PSPC1Q8WXF1 523 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 L3MBTL3Q96JM7 780 aaPredicted RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CENPJQ9HC77 1338 aaPredicted RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 PHF3Q92576 2039 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CSB-PGBD3P0DP91 1061 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 KMT5BQ4FZB7 885 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 ZCRB1Q8TBF4 217 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 LEO1Q8WVC0 666 aaPredicted RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 MYH2Q9UKX2 1941 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 MDC1Q14676 2089 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CLGNO14967 610 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CCDC129Q6ZRS4 1044 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CCDC47Q96A33 483 aaKnown RBP2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 APBB1O00213 710 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 SYCP1Q15431 976 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CEP135Q66GS9 1140 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CCDC148Q8NFR7 591 aa2.52□□□□□ -2.01
PTPRQ-209ENST00000616559 CHD3Q12873 2000 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 MYO7BQ6PIF6 2116 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 PTMSP20962 102 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 NUCB2P80303 420 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 HS1BP3Q53T59 392 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 LARP1Q6PKG0 1096 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 KIAA1211Q6ZU35 1233 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 TRIM22Q8IYM9 498 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 NFATC2IPQ8NCF5 419 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 RTN4Q9NQC3 1192 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 IPO7O95373 1038 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 APOBRQ0VD83 1088 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 FKBP15Q5T1M5 1219 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ZGRF1Q86YA3 2104 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ACRBPQ8NEB7 543 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 SEPT8Q92599 483 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 LRRC45Q96CN5 670 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 NCAPGQ9BPX3 1015 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ZNF652Q9Y2D9 606 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 V9GY48 417 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 SH3BP5O60239 455 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ANAPC15P60006 121 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 AIDAQ96BJ3 306 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 TRIM5Q9C035 493 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 CACNA1BQ00975 2339 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 NAP1L1P55209 391 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 RBM33Q96EV2 1170 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ZHX3Q9H4I2 956 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 GDPD2Q9HCC8 539 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 CHMP3Q9Y3E7 222 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 KIAA0100Q14667 2235 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 EIF3JO75822 258 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 TTLL12Q14166 644 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 SAMD1Q6SPF0 538 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 CIZ1Q9ULV3 898 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 MAPK8IP3Q9UPT6 1336 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 SYCE3A1L190 88 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 LPXNO60711 386 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 LETM1O95202 739 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 IKQ13123 557 aaPredicted RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 FAM114A2Q9NRY5 505 aa2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 MAP1BP46821 2468 aaKnown RBP2.51□□□□□ -2.01
PTPRQ-209ENST00000616559 ANKRD18BA2A2Z9 1011 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 ANKRD62A6NC57 917 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 IBSPP21815 317 aaPredicted RBP2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 FILIP1Q7Z7B0 1213 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 RSPH3Q86UC2 560 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 PCMTD1Q96MG8 357 aaPredicted RBP2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 COG6Q9Y2V7 657 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 MYO15BQ96JP2 1530 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 EIF3DO15371 548 aaKnown RBP eCLIP2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 EVX2Q03828 476 aa2.5□□□□□ -2.01
PTPRQ-209ENST00000616559 LRRFIP1Q32MZ4 808 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms